iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014533

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100830437; BRADI_3g52050

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G52050	BRADI3G52050.1	BRADI3G52050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.0	149	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  + ++++lp C H+fha C+ +w       +++ +CPlCr
   Q: 149  CAVCLSPFlaDAELRLLPaCRHAFHAACVDAW------LRTTPSCPLCR 191
           *********9777*******************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAMDPFPPPA PASTGDPLAV NIPPSLPSPS SPPSSSLNLS PSLLIIAALL AFVFFASVSI 60
HFLLRCLSRS PSAPGLLPRA VHRAASSSNS DDGAEATTTA AAAASSARPA AATASEEVVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCATGG ATCCCTTCCC GCCGCCCGCC CCGGCGTCCA CGGGAGACCC CCTCGCCGTC 60
AACATTCCGC CCTCATTGCC GTCGCCGTCC TCCCCACCCT CCTCGTCGCT CAACCTCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100830437

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005918	Arabidopsis lyrata	37.38	1.00e-23	102.00
IUUC-Ath-007239	Arabidopsis thaliana	37.07	1.00e-23	102.00
IUUC-Bol-015819	Brassica oleracea	37.38	2.00e-25	108.00
IUUC-Bra-017550	Brassica rapa	39.32	1.00e-25	109.00
IUUC-Gma-043797	Glycine max	38.58	8.00e-24	103.00
IUUC-Lpe-050711	Leersia perrieri	61.92	1.00e-62	233.00
IUUC-Mtr-058303	Medicago truncatula	38.07	9.00e-27	113.00
IUUC-Mac-065135	Musa acuminata	55.56	2.00e-28	119.00
IUUC-Ogl-077705	Oryza glaberrima	66.76	2.00e-67	248.00
IUUC-Ogu-078864	Oryza glumaepatula	65.78	6.00e-67	246.00
IUUC-Oin-079511	Oryza indica	72.93	4.00e-63	233.00
IUUC-Ome-081312	Oryza meridionalis	66.08	1.00e-60	226.00
IUUC-Oni-082796	Oryza nivara	66.76	2.00e-67	248.00
IUUC-Opu-083307	Oryza punctata	67.63	2.00e-65	241.00
IUUC-Oru-084702	Oryza rufipogon	66.76	2.00e-67	248.00
IUUC-Pop-100094	Populus trichocarpa	40.50	8.00e-28	116.00
IUUC-Ppe-101209	Prunus persica	32.99	1.00e-23	102.00
IUUC-Sly-111858	Solanum lycopersicum	41.79	1.00e-26	113.00
IUUC-Stu-112105	Solanum tuberosum	42.29	6.00e-27	114.00
IUUC-Sbi-114578	Sorghum bicolor	69.18	7.00e-49	187.00
IUUC-Tca-120922	Theobroma cacao	39.27	4.00e-26	111.00
IUUC-Tae-124222	Triticum aestivum	73.41	4.00e-79	287.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence