iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108989

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377629

Gene Name

SELMODRAFT_121181

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_121181	EFJ14003	EFJ14003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-08	33.8	161	203

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +f  +d++++lp C H+fh++C+  w       + + +CPlCr
   Q: 161  CVVCLGEFeeDDELRILPkCLHAFHLSCIDVW------LRSHSNCPLCR 203
           ********88777*******************......**********8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAPQDYAVPT VDDPGFPFPF PPYSSYPPWY WPPYPPVDFF PPPSPRSSSS GGGISRTSIL 60
TPAIVASVAL LGSAILLVSY YKVFAKYCSA WQIFWGLSGR GGGGNRRGRG ENLHGASSSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCGC AAGACTACGC AGTTCCCACT GTCGATGATC CAGGATTTCC ATTCCCCTTC 60
CCCCCTTACA GCTCCTATCC ACCCTGGTAC TGGCCTCCCT ATCCCCCTGT CGATTTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_121181

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001062	Aegilops tauschii	58.33	5.00e-15	73.60
IUUC-Atr-002971	Amborella trichopoda	43.62	6.00e-31	127.00
IUUC-Aly-006095	Arabidopsis lyrata	45.19	2.00e-25	108.00
IUUC-Ath-007002	Arabidopsis thaliana	47.31	7.00e-19	87.00
IUUC-Bdi-014160	Brachypodium distachyon	43.06	6.00e-29	120.00
IUUC-Bol-016002	Brassica oleracea	64.38	2.00e-25	109.00
IUUC-Bra-017763	Brassica rapa	61.33	3.00e-25	108.00
IUUC-Gma-042838	Glycine max	41.26	1.00e-26	112.00
IUUC-Hvu-047701	Hordeum vulgare	45.14	9.00e-29	120.00
IUUC-Lpe-051375	Leersia perrieri	39.87	6.00e-27	114.00
IUUC-Mtr-058411	Medicago truncatula	39.46	8.00e-28	117.00
IUUC-Mac-065423	Musa acuminata	43.42	5.00e-30	124.00
IUUC-Oba-075508	Oryza barthii	41.61	6.00e-29	120.00
IUUC-Obr-076311	Oryza brachyantha	42.28	2.00e-31	129.00
IUUC-Ogl-077644	Oryza glaberrima	43.57	7.00e-29	120.00
IUUC-Ogu-078989	Oryza glumaepatula	42.86	6.00e-29	120.00
IUUC-Oin-079716	Oryza indica	43.57	9.00e-29	120.00
IUUC-Olo-081066	Oryza longistaminata	43.45	7.00e-31	127.00
IUUC-Ome-081279	Oryza meridionalis	45.00	1.00e-29	122.00
IUUC-Oni-082896	Oryza nivara	43.57	9.00e-29	120.00
IUUC-Opu-083796	Oryza punctata	44.29	1.00e-29	123.00
IUUC-Oru-084594	Oryza rufipogon	44.29	3.00e-29	121.00
IUUC-Osa-086004	Oryza sativa	44.29	3.00e-29	121.00
IUUC-Ppa-095182	Physcomitrella patens	42.95	1.00e-23	103.00
IUUC-Pop-099246	Populus trichocarpa	43.06	3.00e-29	121.00
IUUC-Ppe-101720	Prunus persica	44.59	6.00e-30	124.00
IUUC-Sit-109802	Setaria italica	50.00	5.00e-23	101.00
IUUC-Sly-111110	Solanum lycopersicum	37.50	7.00e-26	110.00
IUUC-Stu-112707	Solanum tuberosum	46.92	4.00e-27	114.00
IUUC-Sbi-114294	Sorghum bicolor	43.18	4.00e-23	101.00
IUUC-Tca-121189	Theobroma cacao	44.59	9.00e-31	126.00
IUUC-Tae-124439	Triticum aestivum	41.83	9.00e-30	123.00
IUUC-Tur-126697	Triticum urartu	50.00	1.00e-23	102.00
IUUC-Vvi-131303	Vitis vinifera	38.10	5.00e-26	110.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence