iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112581

Ensembl Protein ID

PGSC0003DMT400058621

UniProt Accession

M1C302; M1C302_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400022775	PGSC0003DMT400058621	PGSC0003DMT400058621

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-28	99.8	29	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteed.........lvPnltlrrliqawceenss 74
           +p++f CpIsl+lM+dPv+l++Gitydr++Iekw+++gg+ tcP+t+q l++           l+Pn+ +r++iq+wc en+ 
   Q: 29   IPSQFTCPISLDLMKDPVTLSTGITYDRENIEKWINEGGNqTCPITNQDLKSYGsgittidpvLIPNHNIRKMIQQWCVENKE 111
           89*********************************999988*********76522333333437***************9975 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MIATWRKKRT EKRVIKRGFM KKTIMELVIP SQFTCPISLD LMKDPVTLST GITYDRENIE 60
KWINEGGNQT CPITNQDLKS YGSGITTIDP VLIPNHNIRK MIQQWCVENK EHGIDRIPTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGAGTCCT ATCCCTAACA AAACCAAAAA CCAAAAAAAA ATAAAATAAT TCTTTTCAAG 60
GGGTTCGTTA GCTGGTATTT GTTTAGTCAT TCAGATAGTG ACTCGCGTAG AGATGATTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102598134

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	48.37	5.00e-57	213.00
IUUC-Bdi-014644	Brachypodium distachyon	44.39	7.00e-98	349.00
IUUC-Hvu-047616	Hordeum vulgare	44.02	2.00e-103	367.00
IUUC-Lpe-050847	Leersia perrieri	43.65	1.00e-91	329.00
IUUC-Mtr-057926	Medicago truncatula	48.96	5.00e-103	366.00
IUUC-Mac-065672	Musa acuminata	42.76	4.00e-88	317.00
IUUC-Obr-076534	Oryza brachyantha	43.97	7.00e-89	319.00
IUUC-Ogl-076969	Oryza glaberrima	45.10	8.00e-96	342.00
IUUC-Ogu-078447	Oryza glumaepatula	44.50	2.00e-86	311.00
IUUC-Oin-079622	Oryza indica	45.10	8.00e-96	342.00
IUUC-Olo-080664	Oryza longistaminata	44.30	6.00e-61	226.00
IUUC-Ome-081665	Oryza meridionalis	44.68	2.00e-92	331.00
IUUC-Oni-082871	Oryza nivara	45.10	8.00e-96	342.00
IUUC-Opu-084061	Oryza punctata	44.55	8.00e-94	336.00
IUUC-Oru-084561	Oryza rufipogon	45.56	3.00e-96	344.00
IUUC-Osa-086045	Oryza sativa	45.10	8.00e-96	342.00
IUUC-Sit-109976	Setaria italica	45.48	1.00e-98	352.00
IUUC-Sly-111577	Solanum lycopersicum	93.81	0.00e+00	797.00
IUUC-Sbi-114180	Sorghum bicolor	44.37	4.00e-87	313.00
IUUC-Tae-124576	Triticum aestivum	43.95	2.00e-86	311.00
IUUC-Tur-126397	Triticum urartu	51.63	3.00e-50	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence