iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Post-translational Modifications (PTMs)
UniProt
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.10e-07	31.0	163	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C+e ++d      vl+CgH++h++C + +        ++ +CP+C
   Q: 163  CPVCFEYLFDStrdITVLRCGHTMHLECTKDM-----GLHNRYTCPVC 205
           ******99665222558***********9777.....6889******* PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDMGFHENEQ NQEFANLMEI GSGHYGCSHY RRRCKIRAPC CDEIFDCRHC HNEAKDSLHI 60
EQHHRHELPR HEVSKVICSL CETEQDVQQN CSNCGVCMGK YFCSKCKFFD DDLSKKQYHC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAAACCTT TTTAATAATG AGTATGGGAT TTGTTGATTA GGCAAAATAA AAAATCTGGC 60
GTGTTGCTGA GTCATCACTC ATCTTCATAT AAATAAATAT CATCAACATG ATTGCTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004039--Rubredoxin-type_fold
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:1902456--P:regulation of stomatal opening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006141	Arabidopsis lyrata	97.25	7.00e-169	585.00
IUUC-Bdi-014852	Brachypodium distachyon	69.14	2.00e-110	391.00
IUUC-Bol-016321	Brassica oleracea	90.41	2.00e-160	557.00
IUUC-Bra-018009	Brassica rapa	91.44	1.00e-156	544.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	54.18	1.00e-77	282.00
IUUC-Dse-031251	Dothistroma septosporum	38.57	3.00e-52	199.00
IUUC-Fal-036768	Ficedula albicollis	45.61	1.00e-52	198.00
IUUC-Gma-043022	Glycine max	70.00	3.00e-116	410.00
IUUC-Hvu-047256	Hordeum vulgare	65.78	1.00e-109	388.00
IUUC-Lpe-051493	Leersia perrieri	67.59	2.00e-109	387.00
IUUC-Meu-056901	Macropus eugenii	44.40	3.00e-50	190.00
IUUC-Mtr-058584	Medicago truncatula	69.12	9.00e-118	415.00
IUUC-Oba-075821	Oryza barthii	60.20	6.00e-106	377.00
IUUC-Ogl-077866	Oryza glaberrima	70.20	6.00e-107	379.00
IUUC-Ogu-078001	Oryza glumaepatula	60.20	6.00e-106	377.00
IUUC-Oin-079830	Oryza indica	69.29	6.00e-109	385.00
IUUC-Olo-080982	Oryza longistaminata	69.09	3.00e-94	337.00
IUUC-Oni-082329	Oryza nivara	60.82	1.00e-107	382.00
IUUC-Oru-085088	Oryza rufipogon	60.82	1.00e-107	382.00
IUUC-Ppa-095916	Physcomitrella patens	58.39	3.00e-101	360.00
IUUC-Pop-099303	Populus trichocarpa	76.03	4.00e-124	436.00
IUUC-Ppe-101606	Prunus persica	68.07	7.00e-119	419.00
IUUC-Smo-108873	Selaginella moellendorffii	66.13	1.00e-102	364.00
IUUC-Sit-110156	Setaria italica	65.89	3.00e-108	383.00
IUUC-Stu-111990	Solanum tuberosum	65.23	2.00e-112	397.00
IUUC-Sbi-113777	Sorghum bicolor	64.89	3.00e-107	380.00
IUUC-Tgu-116992	Taeniopygia guttata	47.77	2.00e-59	221.00
IUUC-Tca-121698	Theobroma cacao	71.33	2.00e-119	420.00
IUUC-Tae-124038	Triticum aestivum	67.68	7.00e-112	395.00
IUUC-Vvi-131152	Vitis vinifera	72.89	5.00e-121	426.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence