iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017680

Ensembl Protein ID

Bra040450.1-P

UniProt Accession

M4FH72; M4FH72_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra040450	Bra040450.1	Bra040450.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-07	31.2	191	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+  +   ++  + lpC+Hv+h +C+ kw       s + +CP+C+
   Q: 191  CVICQLKYkigEK-QMNLPCKHVYHSECISKW------LSINKICPVCN 232
           99**877777644.445***************......**********7 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MNGDRPDSHY PETGFPYAAS ASYMDFYGGA AQDPLNYAHA GTMHPHQDSL YWTMNTNAYK 60
FGFSGSDNAS FYGSYDLNDH LSRMSIGRTN WEYLPMVNVD ESVPRSVQVG DTDDHSDAEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGGAG ATAGACCAGA TTCTCATTAC CCTGAGACGG GTTTCCCGTA TGCGGCTTCT 60
GCTAGTTACA TGGACTTTTA TGGTGGTGCG GCTCAGGATC CCCTAAACTA TGCTCATGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR033276--BB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0046621--P:negative regulation of organ growth
GO:0051865--P:protein autoubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000725	Aegilops tauschii	48.99	4.00e-52	197.00
IUUC-Atr-002639	Amborella trichopoda	44.58	1.00e-51	196.00
IUUC-Aly-006328	Arabidopsis lyrata	84.68	1.00e-126	444.00
IUUC-Ath-006928	Arabidopsis thaliana	85.94	3.00e-127	447.00
IUUC-Bdi-014877	Brachypodium distachyon	48.80	6.00e-52	196.00
IUUC-Bol-015817	Brassica oleracea	94.69	1.00e-133	468.00
IUUC-Gma-044301	Glycine max	55.24	4.00e-70	257.00
IUUC-Hvu-047311	Hordeum vulgare	46.15	3.00e-50	191.00
IUUC-Lpe-051357	Leersia perrieri	46.34	6.00e-54	203.00
IUUC-Mtr-058385	Medicago truncatula	55.51	2.00e-72	264.00
IUUC-Mac-064965	Musa acuminata	42.45	7.00e-48	183.00
IUUC-Oba-075640	Oryza barthii	49.39	4.00e-54	204.00
IUUC-Obr-076687	Oryza brachyantha	49.80	2.00e-54	205.00
IUUC-Ogl-077270	Oryza glaberrima	49.39	2.00e-54	205.00
IUUC-Ogu-078788	Oryza glumaepatula	49.39	4.00e-54	204.00
IUUC-Oin-079201	Oryza indica	49.39	2.00e-54	205.00
IUUC-Olo-080862	Oryza longistaminata	47.93	2.00e-50	191.00
IUUC-Ome-081787	Oryza meridionalis	48.98	2.00e-53	202.00
IUUC-Oni-082723	Oryza nivara	49.39	2.00e-54	205.00
IUUC-Opu-084164	Oryza punctata	49.59	1.00e-54	205.00
IUUC-Oru-084238	Oryza rufipogon	49.39	2.00e-54	204.00
IUUC-Osa-085989	Oryza sativa	49.39	2.00e-54	205.00
IUUC-Olu-087709	Ostreococcus lucimarinus	44.79	5.00e-19	85.10
IUUC-Pop-099571	Populus trichocarpa	58.61	2.00e-81	295.00
IUUC-Ppe-101485	Prunus persica	56.10	2.00e-70	258.00
IUUC-Sit-110753	Setaria italica	49.00	2.00e-60	224.00
IUUC-Sly-111661	Solanum lycopersicum	44.21	1.00e-55	209.00
IUUC-Stu-111957	Solanum tuberosum	44.81	1.00e-57	215.00
IUUC-Sbi-114143	Sorghum bicolor	49.58	7.00e-60	223.00
IUUC-Tca-121815	Theobroma cacao	56.91	3.00e-79	287.00
IUUC-Tae-123125	Triticum aestivum	47.97	4.00e-52	197.00
IUUC-Tur-125974	Triticum urartu	47.77	1.00e-51	196.00
IUUC-Vvi-130977	Vitis vinifera	52.40	4.00e-74	270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence