iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043911

Ensembl Protein ID

GLYMA13G44420.1

UniProt Accession

I1M5W3; I1M5W3_SOYBN

Genbank Protein ID

KRH23604.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

LOC100790282; GLYMA_13G367300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G44420	GLYMA13G44420.1	GLYMA13G44420.1
GLYMA13G44420	GLYMA13G44420.2	GLYMA13G44420.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-20	72.7	459	494
UBD/Beta-Prp	5.60e-58	198.1	418	755

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v++laf  ++  l +++++dD+tikvWD  tg
   Q: 459  HVGGVNDLAFshPNkQLcVITCGDDKTIKVWDAATG 494
           999*******99764334699***********7766 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           ++ v +spd+ l+ +++ ++ +++++++ g+      ++  h ++v+++ fs+  k    +t+++D+tikvwd  tg   +t++ghe+ v+s+ 
   Q: 418  VNRVIWSPDGALFGVAYSRHIVQIYSYHGGDDvgqHLEIDAHVGGVNDLAFSHPNKqlCVITCGDDKTIKVWDAATGAKQYTFEGHEAPVYSIC 511
           566889***********************999544445689***********99888999********************************86 PP
   S: 102  fsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkllrtltgghtdsvyslsfd 189
            +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++     + +  W+ + g + rt +g  ++s   ++fd
   Q: 512  PHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYEAP-GRWCTTMAYSADGTRLFSCGTskegESSIVEWNESEGAVKRTYQGFRKRSLGVVQFD 604
           5544488***************99987777745555.5599999999999999999872333456888************************** PP
   S: 190  sngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn................ 264
            ++++ +++++d ++k+wd+ + + + t+ +    + s  +rf +++ +l++ + ++ i+i  + +   ll+tl+++                 
   Q: 605  TTKNRYLAAGDDFSIKFWDMDNIQLLTTVDADGGLPASprIRFNKDGALLAVSANENGIKILaNADGIRLLRTLENSLydtsrtseamtkptin 698
           ****************************99999877753378889999999999*******767777788888887778755555555555555 PP
   S: 265  ..................ssvisvavlsfgdnvl.............vlgsedskvniwklkkn 297
                             ssv+++++       +             ++ ++++k +iwkl+++
   Q: 699  pisaaaaaatsaalaeraSSVVAITA-------MngdarnlgdvkprISEESNDKSKIWKLTEI 755
           55555555555555555444444444.......0444445588888888888889999999876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFATFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTAGGTTAT AAGTAATTCT ACTTATCATC TCCCTTCCTT GTCGCCTCCT ATATAAAAAA 60
CACCTACTAT TTGAGCAAGT TCATGTGTCC TATATATATA TTTAGAGAGA GAGAGAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

gmx:100790282

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	79.93	0.00e+00	1836.00
IUUC-Atr-002737	Amborella trichopoda	79.96	0.00e+00	1791.00
IUUC-Aly-005472	Arabidopsis lyrata	84.93	0.00e+00	1882.00
IUUC-Ath-007640	Arabidopsis thaliana	83.91	0.00e+00	1884.00
IUUC-Bdi-014914	Brachypodium distachyon	79.82	0.00e+00	1805.00
IUUC-Bol-015359	Brassica oleracea	84.20	0.00e+00	1881.00
IUUC-Bra-016893	Brassica rapa	84.38	0.00e+00	1879.00
IUUC-Hvu-047688	Hordeum vulgare	80.98	0.00e+00	1746.00
IUUC-Lpe-051514	Leersia perrieri	78.41	0.00e+00	1731.00
IUUC-Mtr-058562	Medicago truncatula	91.90	0.00e+00	2073.00
IUUC-Mac-065382	Musa acuminata	81.20	0.00e+00	1839.00
IUUC-Oba-075912	Oryza barthii	81.42	0.00e+00	1821.00
IUUC-Obr-076921	Oryza brachyantha	80.77	0.00e+00	1818.00
IUUC-Ogl-077334	Oryza glaberrima	81.05	0.00e+00	1824.00
IUUC-Ogu-078494	Oryza glumaepatula	81.05	0.00e+00	1824.00
IUUC-Oin-079720	Oryza indica	79.79	0.00e+00	1813.00
IUUC-Olo-081034	Oryza longistaminata	78.21	0.00e+00	1781.00
IUUC-Ome-081778	Oryza meridionalis	80.96	0.00e+00	1824.00
IUUC-Oni-082412	Oryza nivara	81.49	0.00e+00	1820.00
IUUC-Opu-083406	Oryza punctata	79.49	0.00e+00	1773.00
IUUC-Oru-084328	Oryza rufipogon	81.22	0.00e+00	1822.00
IUUC-Osa-085765	Oryza sativa	81.05	0.00e+00	1824.00
IUUC-Ppe-101370	Prunus persica	90.52	0.00e+00	2090.00
IUUC-Sit-110288	Setaria italica	80.49	0.00e+00	1807.00
IUUC-Sly-111739	Solanum lycopersicum	85.81	0.00e+00	1955.00
IUUC-Sbi-114078	Sorghum bicolor	79.96	0.00e+00	1789.00
IUUC-Tae-125775	Triticum aestivum	81.00	0.00e+00	1853.00
IUUC-Tur-126412	Triticum urartu	79.44	0.00e+00	1824.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence