iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113860

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G378600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g035930	Sb01g035930.1	Sb01g035930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.4	148	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +++dg   +vlp CgH fha+C+ +w       + + +CPlCr
   Q: 148  CAVCLGELRDGetGRVLPrCGHRFHAECVDRW------FRSHVTCPLCR 190
           ********66555566667*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MARRFLTPDT TTPAADGGNG AAAPPASHVV QWHLHGAAAK VAIAGNVVVA VLFFAAVIWR 60
VFFTGTAQEG AAVSPQVEGA SAHGAAEGAL FSSSASRSST PPACASPRSG GLGEADLLAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAGGC GGTTCCTCAC GCCGGACACC ACCACGCCGG CGGCGGACGG CGGCAACGGC 60
GCCGCCGCCC CTCCCGCGTC TCACGTCGTA CAGTGGCACC TGCATGGGGC GGCCGCGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g035930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000788	Aegilops tauschii	52.02	3.00e-33	133.00
IUUC-Bdi-014674	Brachypodium distachyon	53.37	3.00e-29	120.00
IUUC-Hvu-047164	Hordeum vulgare	52.53	5.00e-36	142.00
IUUC-Lpe-050818	Leersia perrieri	50.60	6.00e-31	127.00
IUUC-Oba-075668	Oryza barthii	50.78	3.00e-26	110.00
IUUC-Ogl-077667	Oryza glaberrima	50.26	3.00e-26	110.00
IUUC-Ogu-078113	Oryza glumaepatula	50.26	3.00e-27	114.00
IUUC-Oin-079444	Oryza indica	49.74	3.00e-26	110.00
IUUC-Ome-081633	Oryza meridionalis	51.81	2.00e-27	115.00
IUUC-Oni-082036	Oryza nivara	49.74	3.00e-26	110.00
IUUC-Opu-084104	Oryza punctata	52.15	2.00e-31	127.00
IUUC-Oru-084988	Oryza rufipogon	50.26	6.00e-27	112.00
IUUC-Osa-085900	Oryza sativa	50.26	6.00e-27	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence