iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1355__AT3G12920.1	fgenesh2_kg.3__1355__AT3G12920.1	fgenesh2_kg.3__1355__AT3G12920.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	94.33	1.00e-170	596.00	IUUC-Ath-007181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAVEAHHLNP LFSSNREMIH PVEANGLAYN TQMRYGTVPT FNPTVECQTS LFSPIYNISP 60
VDGLVHQSMK PTIHSVDSSV TFNSENDFLR PVSSRKRSRE ESVVLNPSAY MQSHKNPTDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTTGATAT TTGTTTTTTA GTTTCTCCCT CTATCTCTCT GCGAAAACTG TAATTAAAAC 60
CCCCCACAAC ACAACCTCTT CAACATAACT TCTTCTTCTT CCATCTTTCG TTGCATTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR017066--E3ligase_BOI
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0031347--P:regulation of defense response
GO:0043067--P:regulation of programmed cell death

KEGG

aly:ARALYDRAFT_478654

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000461	Aegilops tauschii	46.40	1.00e-26	112.00
IUUC-Atr-002840	Amborella trichopoda	36.36	9.00e-42	162.00
IUUC-Ath-007181	Arabidopsis thaliana	94.33	4.00e-172	596.00
IUUC-Bdi-014485	Brachypodium distachyon	35.12	3.00e-23	101.00
IUUC-Bol-016115	Brassica oleracea	76.81	4.00e-149	520.00
IUUC-Bra-016625	Brassica rapa	73.64	6.00e-142	496.00
IUUC-Cfa-020660	Canis familiaris	33.73	3.00e-07	48.90
IUUC-Gma-043213	Glycine max	47.04	1.00e-47	182.00
IUUC-Hvu-047294	Hordeum vulgare	33.10	3.00e-28	118.00
IUUC-Mtr-058197	Medicago truncatula	41.95	3.00e-58	218.00
IUUC-Mga-059395	Meleagris gallopavo	35.21	5.00e-08	50.80
IUUC-Mac-065489	Musa acuminata	43.32	4.00e-64	237.00
IUUC-Obr-076027	Oryza brachyantha	38.21	3.00e-31	128.00
IUUC-Ogl-077793	Oryza glaberrima	42.49	8.00e-28	117.00
IUUC-Ogu-078972	Oryza glumaepatula	42.49	7.00e-29	120.00
IUUC-Oin-079684	Oryza indica	42.49	2.00e-27	115.00
IUUC-Oni-082988	Oryza nivara	42.49	9.00e-28	116.00
IUUC-Opu-084039	Oryza punctata	45.31	1.00e-31	129.00
IUUC-Oru-085029	Oryza rufipogon	42.49	2.00e-27	115.00
IUUC-Pop-099748	Populus trichocarpa	52.69	3.00e-70	257.00
IUUC-Ppe-101568	Prunus persica	49.31	3.00e-76	277.00
IUUC-Sit-110637	Setaria italica	47.06	2.00e-33	135.00
IUUC-Sly-111823	Solanum lycopersicum	39.94	8.00e-53	199.00
IUUC-Stu-112335	Solanum tuberosum	43.18	3.00e-66	244.00
IUUC-Sbi-114703	Sorghum bicolor	42.33	8.00e-25	107.00
IUUC-Tca-121003	Theobroma cacao	48.53	1.00e-76	279.00
IUUC-Tae-124021	Triticum aestivum	39.81	1.00e-29	123.00
IUUC-Tur-126541	Triticum urartu	39.81	3.00e-29	120.00
IUUC-Vvi-131641	Vitis vinifera	44.19	2.00e-53	201.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence