iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121309

Ensembl Protein ID

EOY20101

UniProt Accession

A0A061FSM8; A0A061FSM8_THECC

Genbank Protein ID

EOY20101.1

Protein Name

RING/U-box superfamily protein isoform 1

Genbank Nucleotide ID

CM001888

Gene Name

TCM_045494

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_045494	EOY20101	EOY20101
TCM_045494	EOY20102	EOY20102

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-10	40.5	278	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
            + +p++++lM d ++lp+G+++ ++ I+  + + +  c +++++++ee++ Pnl+lr+ +qa++ e+
   Q: 278  ILSDPVTGTLMDDAMILPCGHSFGAAGIQH-VLRLK-VCYTCSHSVSEESVAPNLSLRAAVQAFRREE 343
           578*************************76.44444.4**************************9886 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSSEEISLQN GLNVFQDDPL RAFNCGPTST ATTTTRPGPK TRELTGFIDD KMFSFPPSQP 60
PDFRSSNIYA AAAAAAAASA DRRDPPTHHH RNWGSSAGGG STHSGDDESD GDDVDDEEDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAATCTA AAACCCTACG GCTCGTGCTC TTTGGTAAAT CCCCGAAATT TGATTCCTCA 60
ATTTGTCAAT TTTACCCCTG AAAAGATGCA AAATTACCCT TAACCAGCCA TGTCATCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000192	Aegilops tauschii	54.59	1.00e-59	222.00
IUUC-Atr-002682	Amborella trichopoda	62.50	1.00e-76	278.00
IUUC-Aly-005602	Arabidopsis lyrata	58.37	2.00e-70	258.00
IUUC-Ath-006823	Arabidopsis thaliana	58.78	7.00e-74	270.00
IUUC-Ago-007979	Ashbya gossypii	48.39	1.80e+00	28.10
IUUC-Ame-011126	Astyanax mexicanus	36.62	3.00e-08	51.60
IUUC-Bdi-014337	Brachypodium distachyon	62.05	5.00e-65	240.00
IUUC-Bol-015470	Brassica oleracea	56.96	2.00e-68	251.00
IUUC-Bra-017015	Brassica rapa	58.30	1.00e-72	265.00
IUUC-Gma-044133	Glycine max	66.44	3.00e-96	344.00
IUUC-Hvu-047241	Hordeum vulgare	56.16	3.00e-22	95.10
IUUC-Mtr-058650	Medicago truncatula	70.73	2.00e-93	335.00
IUUC-Mac-065387	Musa acuminata	59.92	6.00e-82	296.00
IUUC-Oba-075942	Oryza barthii	59.62	2.00e-66	245.00
IUUC-Obr-076573	Oryza brachyantha	60.09	7.00e-67	246.00
IUUC-Ogl-077795	Oryza glaberrima	56.44	1.00e-63	236.00
IUUC-Ogu-078142	Oryza glumaepatula	59.62	7.00e-67	246.00
IUUC-Ome-081788	Oryza meridionalis	51.17	3.00e-51	196.00
IUUC-Oni-082512	Oryza nivara	60.98	3.00e-66	245.00
IUUC-Opu-083147	Oryza punctata	59.62	9.00e-67	246.00
IUUC-Oru-085135	Oryza rufipogon	60.98	3.00e-66	245.00
IUUC-Ppa-095972	Physcomitrella patens	60.36	4.00e-56	211.00
IUUC-Pop-099896	Populus trichocarpa	80.49	3.00e-112	397.00
IUUC-Ppe-101532	Prunus persica	71.48	8.00e-111	392.00
IUUC-Spo-108182	Schizosaccharomyces pombe	29.41	9.00e-04	36.20
IUUC-Smo-109655	Selaginella moellendorffii	53.67	3.00e-48	184.00
IUUC-Sly-111788	Solanum lycopersicum	67.80	7.00e-98	350.00
IUUC-Stu-112107	Solanum tuberosum	69.70	4.00e-101	360.00
IUUC-Sbi-113910	Sorghum bicolor	60.87	7.00e-59	219.00
IUUC-Tae-125313	Triticum aestivum	59.07	5.00e-66	243.00
IUUC-Vvi-131465	Vitis vinifera	72.39	7.00e-116	409.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence