iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121146

Ensembl Protein ID

EOY05973

UniProt Accession

A0A061EMT0; A0A061EMT0_THECC

Genbank Protein ID

EOY05973.1

Protein Name

Helicase protein with RING/U-box domain

Genbank Nucleotide ID

CM001882

Gene Name

TCM_020832

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_020832	EOY05973	EOY05973

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-08	33.7	888	928

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iC+e+ +d p+++pC H ++++Cl   w      + +  +CP+Cr
   Q: 888  CPICMESADD-PVLTPCAHRMCRECLlSSW-----RTPTVGLCPICR 928
           **********.999***********99999.....5777889****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEAIDIDTVE DKKIQQSQSV ADNNVVSVVK LLPNDPDSCL QSNTVSRMVT ATGFRVSTLI 60
GSRDQFEESE PVKTQVKEEP FLKVKEEPDL GLQRNVLMKE DSGIKVKEEP DLGFDIKFPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACGGCATTTC GGGGCTGCCT CATTCCTACG AAATAGAAGA ATTAGGAAAA TAGCAAGGGT 60
TGGTTAATGT AACTTGCCCC AAAAAATTTC TTACCCTATT TAACCCACCG CTTTTCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N
PF00097--zf-C3HC4

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0004386--F:helicase activity
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000167	Aegilops tauschii	60.24	0.00e+00	1101.00
IUUC-Aml-001237	Ailuropoda melanoleuca	37.63	1.00e-99	357.00
IUUC-Atr-003058	Amborella trichopoda	63.29	0.00e+00	1155.00
IUUC-Aca-004994	Anolis carolinensis	39.13	4.00e-107	382.00
IUUC-Aly-005600	Arabidopsis lyrata	74.47	0.00e+00	1401.00
IUUC-Ath-007079	Arabidopsis thaliana	64.19	0.00e+00	1393.00
IUUC-Acl-008022	Aspergillus clavatus	32.57	2.00e-128	452.00
IUUC-Ate-010536	Aspergillus terreus	31.28	4.00e-111	395.00
IUUC-Ame-011743	Astyanax mexicanus	38.89	3.00e-102	365.00
IUUC-Bta-013391	Bos taurus	36.90	3.00e-109	389.00
IUUC-Bci-013741	Botrytis cinerea	33.16	3.00e-141	495.00
IUUC-Bdi-014496	Brachypodium distachyon	60.02	0.00e+00	1089.00
IUUC-Bol-015995	Brassica oleracea	63.13	0.00e+00	1392.00
IUUC-Bra-017004	Brassica rapa	61.57	0.00e+00	1319.00
IUUC-Cja-019685	Callithrix jacchus	36.15	9.00e-109	387.00
IUUC-Cfa-020485	Canis familiaris	37.59	7.00e-100	358.00
IUUC-Cpo-021361	Cavia porcellus	37.78	2.00e-102	365.00
IUUC-Csa-023894	Chlorocebus sabaeus	37.21	8.00e-109	387.00
IUUC-Cho-024891	Choloepus hoffmanni	36.90	5.00e-68	252.00
IUUC-Dre-027867	Danio rerio	37.91	6.00e-111	394.00
IUUC-Dno-029517	Dasypus novemcinctus	36.56	1.00e-98	353.00
IUUC-Dor-030651	Dipodomys ordii	31.25	4.00e-79	289.00
IUUC-Dse-031471	Dothistroma septosporum	32.58	8.00e-137	481.00
IUUC-Dme-031815	Drosophila melanogaster	30.28	8.00e-66	244.00
IUUC-Ete-032421	Echinops telfairi	32.72	1.00e-78	287.00
IUUC-Eca-034058	Equus caballus	36.56	2.00e-96	346.00
IUUC-Fca-035390	Felis catus	36.88	6.00e-100	358.00
IUUC-Gma-042857	Glycine max	59.88	0.00e+00	1195.00
IUUC-Ggo-045628	Gorilla gorilla	36.26	2.00e-109	390.00
IUUC-Hsa-045930	Homo sapiens	36.26	2.00e-109	389.00
IUUC-Hvu-047747	Hordeum vulgare	60.53	0.00e+00	1107.00
IUUC-Itr-048493	Ictidomys tridecemlineatus	37.37	6.00e-109	388.00
IUUC-Lch-050617	Latimeria chalumnae	40.72	3.00e-117	416.00
IUUC-Lpe-051123	Leersia perrieri	62.20	0.00e+00	1150.00
IUUC-Loc-052785	Lepisosteus oculatus	40.00	3.00e-115	409.00
IUUC-Laf-054309	Loxodonta africana	37.24	3.00e-100	358.00
IUUC-Mcc-055493	Macaca mulatta	36.41	9.00e-110	390.00
IUUC-Mtr-058194	Medicago truncatula	62.77	0.00e+00	1155.00
IUUC-Mmr-061043	Microcebus murinus	38.04	2.00e-99	356.00
IUUC-Mmu-064338	Mus musculus	38.29	5.00e-104	371.00
IUUC-Mac-064548	Musa acuminata	59.61	0.00e+00	1090.00
IUUC-Mpu-066781	Mustela putorius furo	37.70	2.00e-99	356.00
IUUC-Mlu-068076	Myotis lucifugus	36.89	3.00e-101	362.00
IUUC-Nle-069947	Nomascus leucogenys	36.26	2.00e-109	390.00
IUUC-Opr-070388	Ochotona princeps	42.29	1.00e-52	200.00
IUUC-Ont-071782	Oreochromis niloticus	39.08	4.00e-110	392.00
IUUC-Oan-073331	Ornithorhynchus anatinus	36.54	1.00e-102	366.00
IUUC-Ocu-074705	Oryctolagus cuniculus	37.70	4.00e-107	382.00
IUUC-Oba-075316	Oryza barthii	60.02	0.00e+00	1118.00
IUUC-Obr-076834	Oryza brachyantha	60.52	0.00e+00	1158.00
IUUC-Ogl-077508	Oryza glaberrima	61.77	0.00e+00	1135.00
IUUC-Ogu-078083	Oryza glumaepatula	60.13	0.00e+00	1140.00
IUUC-Oin-079893	Oryza indica	61.99	0.00e+00	1155.00
IUUC-Olo-080615	Oryza longistaminata	62.39	0.00e+00	1162.00
IUUC-Oni-082773	Oryza nivara	60.34	0.00e+00	1141.00
IUUC-Opu-083675	Oryza punctata	62.47	0.00e+00	1159.00
IUUC-Oru-084543	Oryza rufipogon	60.13	0.00e+00	1136.00
IUUC-Oga-088120	Otolemur garnettii	37.88	2.00e-91	329.00
IUUC-Oar-089293	Ovis aries	37.07	2.00e-109	389.00
IUUC-Ptr-091418	Pan troglodytes	36.26	2.00e-109	389.00
IUUC-Pfo-096540	Poecilia formosa	38.43	2.00e-107	383.00
IUUC-Pab-098010	Pongo abelii	37.39	6.00e-109	388.00
IUUC-Pop-099537	Populus trichocarpa	68.74	0.00e+00	1324.00
IUUC-Pca-100648	Procavia capensis	36.61	4.00e-103	369.00
IUUC-Ppe-102107	Prunus persica	60.95	0.00e+00	1342.00
IUUC-Rno-106130	Rattus norvegicus	37.79	8.00e-108	384.00
IUUC-Sce-106396	Saccharomyces cerevisiae	31.96	7.00e-105	374.00
IUUC-Sja-107985	Schizosaccharomyces japonicus	33.81	4.00e-136	478.00
IUUC-Ssl-108388	Sclerotinia sclerotiorum	33.87	1.00e-139	489.00
IUUC-Sit-110795	Setaria italica	61.83	0.00e+00	1070.00
IUUC-Sly-111031	Solanum lycopersicum	60.92	0.00e+00	1364.00
IUUC-Stu-112600	Solanum tuberosum	61.73	0.00e+00	1367.00
IUUC-Sar-113719	Sorex araneus	38.16	6.00e-110	391.00
IUUC-Sbi-114616	Sorghum bicolor	59.36	0.00e+00	1060.00
IUUC-Ssc-116186	Sus scrofa	36.73	7.00e-108	384.00
IUUC-Tsy-118957	Tarsius syrichta	37.01	6.00e-101	361.00
IUUC-Tni-120618	Tetraodon nigroviridis	37.68	1.00e-108	387.00
IUUC-Tre-121896	Trichoderma reesei	34.69	1.00e-137	483.00
IUUC-Tae-124792	Triticum aestivum	60.68	0.00e+00	1108.00
IUUC-Tur-125999	Triticum urartu	57.32	0.00e+00	1050.00
IUUC-Ttr-129132	Tursiops truncatus	26.48	4.00e-61	229.00
IUUC-Vda-129849	Verticillium dahliae	32.72	1.00e-122	433.00
IUUC-Vpa-130672	Vicugna pacos	37.41	8.00e-102	364.00
IUUC-Vvi-131508	Vitis vinifera	60.31	0.00e+00	1415.00
IUUC-Xtr-132730	Xenopus tropicalis	41.50	2.00e-121	429.00
IUUC-Xma-133384	Xiphophorus maculatus	37.48	3.00e-108	385.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence