iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114574

UUCD1 version

UUC-SoB-01046

Ensembl Protein ID

Sb06g005210.1

UniProt Accession

A0A1B6PJZ2; A0A1B6PJZ2_SORBI

Genbank Protein ID

KXG25957.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G036400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g005210	Sb06g005210.1	Sb06g005210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-08	34.0	23	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ +   + ++ lpC Hvfh+dC+ +w     + s + +CPlCr
   Q: 23   CRVCLSKIrlAEATRRLPCRHVFHRDCVDRW-----LLSCKRTCPLCR 65
           9*****777766699****************.....4555566****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MCIKARSEAT QAGDDGGCPA DECRVCLSKI RLAEATRRLP CRHVFHRDCV DRWLLSCKRT 60
CPLCRVYVTD GNKQPVAAKH TSREAQALAD DLVIWFSTVL VPGF 104

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCAAGGTTA TGTGCATCAA GGCAAGATCG GAGGCAACAC AGGCCGGCGA TGACGGCGGT 60
TGCCCAGCGG ATGAGTGCCG CGTCTGCCTG TCAAAGATTC GGCTCGCCGA GGCTACCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001107	Aegilops tauschii	65.38	6.00e-29	117.00
IUUC-Atr-003149	Amborella trichopoda	44.33	7.00e-18	81.30
IUUC-Bdi-014272	Brachypodium distachyon	67.92	3.00e-33	132.00
IUUC-Gma-043573	Glycine max	39.02	4.00e-14	69.30
IUUC-Hvu-047425	Hordeum vulgare	62.50	1.00e-28	117.00
IUUC-Lpe-051646	Leersia perrieri	66.67	3.00e-35	139.00
IUUC-Mvi-060247	Microbotryum violaceum	45.10	9.00e-12	64.70
IUUC-Mac-065194	Musa acuminata	50.00	8.00e-19	84.00
IUUC-Oba-075537	Oryza barthii	70.75	8.00e-38	147.00
IUUC-Obr-076744	Oryza brachyantha	73.58	6.00e-39	151.00
IUUC-Ogl-077202	Oryza glaberrima	70.75	8.00e-38	147.00
IUUC-Ogu-078719	Oryza glumaepatula	70.75	8.00e-38	147.00
IUUC-Oin-079328	Oryza indica	70.75	8.00e-38	147.00
IUUC-Olo-080984	Oryza longistaminata	68.87	1.00e-36	144.00
IUUC-Ome-081534	Oryza meridionalis	70.75	1.00e-37	147.00
IUUC-Oni-082733	Oryza nivara	70.75	8.00e-38	147.00
IUUC-Opu-083956	Oryza punctata	72.64	2.00e-36	143.00
IUUC-Oru-084287	Oryza rufipogon	70.75	8.00e-38	147.00
IUUC-Osa-085711	Oryza sativa	70.75	8.00e-38	147.00
IUUC-Ppe-101424	Prunus persica	40.48	1.00e-14	70.50
IUUC-Pgr-103650	Puccinia graminis	43.28	2.00e-10	58.50
IUUC-Sit-110455	Setaria italica	78.30	8.00e-38	147.00
IUUC-Stu-112532	Solanum tuberosum	44.71	3.00e-17	79.00
IUUC-Tca-121024	Theobroma cacao	39.02	6.00e-14	68.90
IUUC-Tae-124249	Triticum aestivum	63.46	1.00e-28	117.00
IUUC-Vvi-131072	Vitis vinifera	33.65	1.00e-15	74.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence