iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095980

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544974

Gene Name

PHYPADRAFT_18593

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S85_173V6	PP1S85_173V6.1	PP1S85_173V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	29.0	130	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl+ f   ++ +++lp C+H fh+ C+  w         + +CP+Cr
   Q: 130  CVVCLSGFvegEK-VRLLPhCKHGFHLVCIDTW------LLSHTTCPVCR 172
           ********77555.*******************......89999*****8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MTAGLRRLDV HFDFSRVTIN VQNATTFPQS PTSHPPSHDH SGPEQSSYFA RSLNSSVVVV 60
MGVLLFALIA AAFINTIARC LLRRRQTQPS DDHNEREKGL DKSVIEALPV VAYSPDSIKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTGTCGGC ACGAGCTCCG TGCCCTAAGC ATTAATGTCT TGTCTGGAAA GGTTACCCTG 60
TTCCCGATTG TCACAGATCG AAGGTAGCTT GTTGCGCTCT GGAGGTTGGG AGTCAAATTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_18593

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005951	Arabidopsis lyrata	45.22	3.00e-22	97.10
IUUC-Ath-006766	Arabidopsis thaliana	46.02	2.00e-24	104.00
IUUC-Bra-017290	Brassica rapa	40.41	5.00e-25	106.00
IUUC-Lpe-051348	Leersia perrieri	40.00	6.00e-20	89.70
IUUC-Mtr-058744	Medicago truncatula	45.28	2.00e-23	100.00
IUUC-Mac-064725	Musa acuminata	37.09	1.00e-21	95.10
IUUC-Obr-076307	Oryza brachyantha	39.17	6.00e-20	89.70
IUUC-Ogu-078127	Oryza glumaepatula	40.00	6.00e-20	90.50
IUUC-Olo-080939	Oryza longistaminata	40.00	1.00e-19	88.60
IUUC-Ome-081946	Oryza meridionalis	40.00	2.00e-19	89.00
IUUC-Oni-083084	Oryza nivara	40.00	9.00e-20	90.10
IUUC-Opu-084141	Oryza punctata	40.37	1.00e-18	86.30
IUUC-Oru-084596	Oryza rufipogon	40.00	5.00e-20	90.50
IUUC-Osa-085865	Oryza sativa	40.00	1.00e-19	89.40
IUUC-Smo-109500	Selaginella moellendorffii	39.10	3.00e-27	113.00
IUUC-Sit-110757	Setaria italica	46.05	1.00e-19	88.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence