iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114374

UUCD1 version

UUC-SoB-01009

Ensembl Protein ID

Sb06g020340.1

UniProt Accession

A0A1B6PLN0; A0A1B6PLN0_SORBI

Genbank Protein ID

KXG26570.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G123000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g020340	Sb06g020340.1	Sb06g020340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-24	84.6	211	249

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+d v+++a   d +ll s s+D+t+kvW l + ++l+s
   Q: 211  HADAVSGVAAsADgRLLFSVSWDKTLKVWALPSLRCLQS 249
           999*****9995559*********************996 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATGTGTGTG DGDGDREGNG NSSKLGTAVS SSSSTVSTSS AAAAAVSEAS SSSTSLPSLP 60
SLSSATSASL AASFAHVTTL LPLSASSSAA VVAAAAGDSL HGGLVVVARP ACVALHDLST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCACGG GCACCGGCAC CGGCACCGGC GACGGAGACG GAGACAGGGA GGGGAACGGC 60
AACAGCAGCA AGCTGGGCAC CGCGGTGTCG TCCTCTTCGT CGACCGTCTC CACGTCGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-015036	Brachypodium distachyon	71.90	8.00e-100	356.00
IUUC-Bol-015247	Brassica oleracea	47.08	4.00e-73	267.00
IUUC-Bra-017464	Brassica rapa	46.77	1.00e-72	266.00
IUUC-Hvu-047047	Hordeum vulgare	76.38	7.00e-106	375.00
IUUC-Lpe-051055	Leersia perrieri	65.19	1.00e-86	312.00
IUUC-Mtr-057789	Medicago truncatula	49.68	2.00e-73	268.00
IUUC-Mac-065000	Musa acuminata	54.15	1.00e-76	279.00
IUUC-Ogl-077746	Oryza glaberrima	77.84	1.00e-93	336.00
IUUC-Ogu-078557	Oryza glumaepatula	77.84	4.00e-94	337.00
IUUC-Oin-079061	Oryza indica	77.84	5.00e-94	337.00
IUUC-Ome-081975	Oryza meridionalis	77.84	3.00e-90	324.00
IUUC-Oni-083112	Oryza nivara	77.84	9.00e-94	336.00
IUUC-Opu-083152	Oryza punctata	77.97	3.00e-116	411.00
IUUC-Oru-084254	Oryza rufipogon	77.84	9.00e-94	336.00
IUUC-Osa-086021	Oryza sativa	77.84	3.00e-93	335.00
IUUC-Smo-108947	Selaginella moellendorffii	41.89	4.00e-40	157.00
IUUC-Sly-111566	Solanum lycopersicum	44.31	1.00e-70	259.00
IUUC-Tca-121847	Theobroma cacao	48.51	3.00e-72	265.00
IUUC-Tae-125856	Triticum aestivum	75.91	3.00e-111	394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence