iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114449

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G189700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026310	Sb06g026310.1	Sb06g026310.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-08	33.8	96	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cle++   ++ ++ +++C H+fh+ C+ +w        +e +CPlCr
   Q: 96   CRVCLERLeatDE-VRrLGNCTHAFHTRCIDRW-----IDLGEVTCPLCR 139
           ********88544.661566*************.....577899*****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MTFPLVCYCN AVPRPVAALF KLLHAVALVF VLVLCFLGLY EFPYDPEDHA PVINGPPRRP 60
RGDAPRPEAV KQRLPLVEFL ELSSSSSSSG AAEPTCRVCL ERLEATDEVR RLGNCTHAFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAAAGCCA AAACTACACA GACGCGCATG CACGCGGCGC CGGTCAGATC ATGACCTTCC 60
CGCTGGTCTG CTACTGCAAC GCGGTGCCGC GCCCCGTGGC CGCGCTGTTC AAGCTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g026310

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014370	Brachypodium distachyon	60.65	4.00e-39	152.00
IUUC-Bra-016656	Brassica rapa	47.69	6.00e-14	68.90
IUUC-Hvu-047845	Hordeum vulgare	61.27	2.00e-55	207.00
IUUC-Lpe-050863	Leersia perrieri	65.38	3.00e-52	196.00
IUUC-Mac-064695	Musa acuminata	46.10	7.00e-28	115.00
IUUC-Oba-075162	Oryza barthii	70.70	8.00e-58	214.00
IUUC-Obr-076437	Oryza brachyantha	69.38	1.00e-43	168.00
IUUC-Ogl-077806	Oryza glaberrima	69.86	1.00e-49	187.00
IUUC-Ogu-078778	Oryza glumaepatula	70.70	8.00e-58	214.00
IUUC-Oin-079413	Oryza indica	70.70	8.00e-58	214.00
IUUC-Ome-081854	Oryza meridionalis	70.06	2.00e-57	213.00
IUUC-Oni-082515	Oryza nivara	70.70	8.00e-58	214.00
IUUC-Opu-083540	Oryza punctata	68.15	3.00e-56	209.00
IUUC-Oru-084686	Oryza rufipogon	70.70	2.00e-57	213.00
IUUC-Osa-085424	Oryza sativa	70.70	8.00e-58	214.00
IUUC-Sit-110391	Setaria italica	72.78	1.00e-57	215.00
IUUC-Tae-125907	Triticum aestivum	64.74	2.00e-55	206.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence