iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081747

Ensembl Protein ID

OMERI04G19310.1

UniProt Accession

A0A0E0DHP0; A0A0E0DHP0_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI04G19310	OMERI04G19310.1	OMERI04G19310.1
OMERI04G19310	OMERI04G19310.2	OMERI04G19310.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-20	73.2	496	567

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++flCp++ ++++ Pv++++G+t++r  I +w+++g + cP+t+q+l++ ++   n +l+rli++w +e+
   Q: 496  IPSDFLCPLTRQIFNRPVTIETGQTFERHPIVQWFDKGIRVCPITGQELESLSIpDINRVLKRLIDNWKSEH 567
           8************************************************999997779**********9987 PP

Organism

Oryza meridionalis

Protein Sequence
(Fasta)

MAPPPSSLLR DLLAADGFRN RRKPPDSNPP AAPRTASMPL QHRRPSRPAR SQSDVLTRSR 60
LREANNVGTS DGDGVDAGEE QRTATRRSSA SLMSARSYNN NKDSGGGGGG GAMRGGSAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAAAAATA CGACAGCCAT TTTGACCCGT GATGTGACAG CAAACATTTG ACGCAGTAAC 60
ACAACCAACA CTTGAGAGCG TCAAAGTGGT GCACGCAAGA AAACGCCTCT ATACTTTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	34.15	1.00e-70	261.00
IUUC-Bdi-014999	Brachypodium distachyon	63.98	0.00e+00	1022.00
IUUC-Gma-044073	Glycine max	33.89	3.00e-60	226.00
IUUC-Hvu-047722	Hordeum vulgare	61.94	0.00e+00	639.00
IUUC-Lpe-051567	Leersia perrieri	70.93	0.00e+00	1160.00
IUUC-Mtr-058670	Medicago truncatula	30.56	7.00e-100	357.00
IUUC-Mac-065130	Musa acuminata	38.00	5.00e-70	258.00
IUUC-Oba-075449	Oryza barthii	93.16	0.00e+00	1570.00
IUUC-Obr-076588	Oryza brachyantha	80.14	0.00e+00	1016.00
IUUC-Ogu-078984	Oryza glumaepatula	92.38	0.00e+00	1533.00
IUUC-Olo-080563	Oryza longistaminata	84.42	0.00e+00	1167.00
IUUC-Oni-082227	Oryza nivara	92.94	0.00e+00	1560.00
IUUC-Opu-083803	Oryza punctata	84.92	0.00e+00	1428.00
IUUC-Oru-084717	Oryza rufipogon	93.05	0.00e+00	1566.00
IUUC-Osa-085390	Oryza sativa	92.89	0.00e+00	1220.00
IUUC-Pop-099189	Populus trichocarpa	36.70	1.00e-74	274.00
IUUC-Ppe-101493	Prunus persica	39.50	1.00e-77	284.00
IUUC-Sit-110010	Setaria italica	58.21	0.00e+00	846.00
IUUC-Stu-112239	Solanum tuberosum	37.39	1.00e-74	273.00
IUUC-Sbi-113947	Sorghum bicolor	60.41	0.00e+00	940.00
IUUC-Tca-121435	Theobroma cacao	40.59	7.00e-86	311.00
IUUC-Tae-125513	Triticum aestivum	61.26	0.00e+00	937.00
IUUC-Tur-126526	Triticum urartu	54.96	8.00e-125	440.00
IUUC-Vvi-130964	Vitis vinifera	40.00	9.00e-84	304.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence