iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005424

UUCD1 version

UUC-ArL-00440

Ensembl Protein ID

Al_scaffold_0006_2033

UniProt Accession

D7M069; D7M069_ARALL

Genbank Protein ID

EFH50288.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348718

Gene Name

FBX2; ARALYDRAFT_661968

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0006_2033	Al_scaffold_0006_2033	Al_scaffold_0006_2033

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-32	109.7	246	282
UBD/Beta-Prp	3.30e-45	155.2	202	461

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++++t+la+ d t + sGs+D ++++WD ++ +++k
   Q: 246  GHEGPITSLAL-DmTSIFSGSWDMSVRIWDRSSMKCVK 282
           8**********.779***************88888876 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           + d++ll++g++dg i  w+  +g                 +l ghe+++t++ ++ +   + +gs D+ +++wd s+ kcv tl+ h
   Q: 202  AADTKLLVAGGTDGFIHCWKSLDGLRnlfdltgfqkektDFRLWGHEGPITSLALDMT--SIFSGSWDMSVRIWDRSSMKCVKTLR-H 286
           45899******************98899******999887789***************..599***********************.* PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......ktgkllrtl 175
           +d v+ l+ ++   +l+s+s  + + +wd++ ++ l  + + h+g++ +++ + +g+ l++G+ D+ ++++ +       +  l+ ++
   Q: 287  SDWVWGLAPHE--TSLASTSGSD-VYIWDIDRETPLTIIRDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIrrygseTSVVLISQW 371
           **********9..8888888655.89***********9***********************************999997778899999 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlq..........tgec..........vrtlnghtdnvksvrfspnderlvsgssD 243
              ht++vyslsf+   + lvs+s dg++ l d++          +              r l+g  +n  sv++    +r+v+g+++
   Q: 372  MP-HTSPVYSLSFEF--PWLVSASGDGKLALIDVRkllktnrrayS--RrissstveppQRMLHGFGSNLFSVDVG--CDRIVCGGEE 452
           98.**********99..99****************99886555551..0556666677799999999******999..********** PP
   S: 244  gsiriWdlr 252
           g +riW+ +
   Q: 453  GIVRIWNFT 461
           ******976 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLGETSNEQR SESDTLNLRI ENGSVEIPSV KLSCQQKKGT LVPSGSKQLL SDKDLSTTII 60
DLPQALISEI LNCLDPKELG LVSCVSTCLH KLASEHHAWK EFYRERWGLP VVFGATSSGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGGAG GTACTTTCGC CCTAACCATT ATCCCATGTA TTTAGACGGG TCACTTCATT 60
GGCTCACCCT TTGTGAAGAA ACCAAGTTAT TATATTTCGA TCTTCACACA GAGACTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00646--F-box
PF00400--WD40

SMART

SM00256--FBOX
SM00320--WD40

Gene Ontology

GO:0016036--P:cellular response to phosphate starvation

KEGG

aly:ARALYDRAFT_661968

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000413	Aegilops tauschii	55.77	1.00e-156	546.00
IUUC-Atr-002870	Amborella trichopoda	52.40	3.00e-135	474.00
IUUC-Ath-007005	Arabidopsis thaliana	93.58	0.00e+00	970.00
IUUC-Bdi-014622	Brachypodium distachyon	56.50	2.00e-159	555.00
IUUC-Bol-016449	Brassica oleracea	82.90	0.00e+00	863.00
IUUC-Bra-017684	Brassica rapa	90.06	0.00e+00	628.00
IUUC-Gma-044132	Glycine max	68.12	0.00e+00	630.00
IUUC-Hvu-047789	Hordeum vulgare	55.97	4.00e-159	553.00
IUUC-Lpe-051245	Leersia perrieri	54.38	2.00e-149	521.00
IUUC-Mtr-058000	Medicago truncatula	65.02	0.00e+00	630.00
IUUC-Mac-065354	Musa acuminata	59.46	1.00e-159	555.00
IUUC-Oba-074979	Oryza barthii	56.34	3.00e-157	547.00
IUUC-Obr-076615	Oryza brachyantha	56.29	9.00e-158	549.00
IUUC-Ogl-077075	Oryza glaberrima	56.34	1.00e-157	548.00
IUUC-Ogu-078476	Oryza glumaepatula	56.13	4.00e-157	547.00
IUUC-Oin-079267	Oryza indica	56.34	2.00e-157	548.00
IUUC-Olo-080272	Oryza longistaminata	56.11	4.00e-157	547.00
IUUC-Ome-081994	Oryza meridionalis	56.34	4.00e-157	547.00
IUUC-Oni-082607	Oryza nivara	56.34	2.00e-157	548.00
IUUC-Opu-083533	Oryza punctata	56.37	6.00e-159	553.00
IUUC-Oru-084485	Oryza rufipogon	56.34	6.00e-157	546.00
IUUC-Osa-085675	Oryza sativa	56.34	3.00e-157	547.00
IUUC-Ppa-095179	Physcomitrella patens	42.79	2.00e-104	372.00
IUUC-Pop-099631	Populus trichocarpa	64.60	0.00e+00	667.00
IUUC-Ppe-102090	Prunus persica	62.71	0.00e+00	653.00
IUUC-Smo-108901	Selaginella moellendorffii	42.96	2.00e-96	345.00
IUUC-Sit-110702	Setaria italica	57.08	2.00e-152	531.00
IUUC-Sly-110878	Solanum lycopersicum	65.48	0.00e+00	635.00
IUUC-Stu-112399	Solanum tuberosum	62.87	1.00e-178	618.00
IUUC-Sbi-114384	Sorghum bicolor	54.79	2.00e-147	514.00
IUUC-Tca-121388	Theobroma cacao	67.84	0.00e+00	694.00
IUUC-Tae-125186	Triticum aestivum	55.77	6.00e-157	546.00
IUUC-Tur-126520	Triticum urartu	55.58	4.00e-156	544.00
IUUC-Vvi-131268	Vitis vinifera	70.08	0.00e+00	651.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence