iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095988

Ensembl Protein ID

PP1S117_107V6.2

UniProt Accession

A9STK8; A9STK8_PHYPA

Genbank Protein ID

EDQ65465.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545006

Gene Name

PHYPADRAFT_83812

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S117_107V6	PP1S117_107V6.2	PP1S117_107V6.2
PP1S117_107V6	PP1S117_107V6.1	PP1S117_107V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-08	34.6	210	260

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cg ++  ++  + C++C++w+H +C+k++     +  +++ Cp+C++
   Q: 210  TTCGTCGGSYTADEFWIGCDICEKWYHGKCVKIT-PARAEHIKQYKCPSCSN 260
           67********************************.666666677******86 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEGASVSTNP RSVDEVFKDY RGRRGGMLKA LIADVEEFYR QCDPEKENLC LYGYPDESWE 60
VNLPADEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATGTGCAG CTTGGGGTGA CAGAGGATCC GTTCTGGTCT ACAATTAGTT GCAGCTGCGA 60
TTTGTCGATT GCCTTGGCTG AGGCGTTTTA GGTTTTTTCG TGCACTCTCT GTGTAGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_83812

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	52.57	1.00e-75	275.00
IUUC-Bdi-014258	Brachypodium distachyon	55.91	1.00e-82	298.00
IUUC-Hvu-047100	Hordeum vulgare	59.29	4.00e-84	303.00
IUUC-Lpe-050738	Leersia perrieri	58.50	6.00e-86	309.00
IUUC-Oba-075021	Oryza barthii	54.18	1.00e-79	288.00
IUUC-Ogl-077422	Oryza glaberrima	57.71	2.00e-80	290.00
IUUC-Ogu-079021	Oryza glumaepatula	54.18	2.00e-79	288.00
IUUC-Oin-079801	Oryza indica	57.71	2.00e-80	291.00
IUUC-Ome-081881	Oryza meridionalis	57.31	1.00e-79	288.00
IUUC-Oni-082314	Oryza nivara	57.71	2.00e-80	291.00
IUUC-Opu-083359	Oryza punctata	58.10	1.00e-80	291.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence