iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114216

UUCD1 version

UUC-SoB-00757

Ensembl Protein ID

Sb04g004780.1

UniProt Accession

A0A1B6Q0V6; A0A1B6Q0V6_SORBI

Genbank Protein ID

KXG31561.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G018400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g004780	Sb04g004780.1	Sb04g004780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-07	30.8	162	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  + dg   + lp C Hvfh+ C+  w       + + +CP+Cr
   Q: 162  CAVCLGAMADGdaARRLPsCMHVFHRGCVDVW------LRERSTCPVCR 204
           ********66555666667*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPSRQPPSPS SLPPAPAPGT AAVQALAGAA SCLPADQSCF TVSAVSVGAP SYYSSRHDAA 60
AAIVGTHACC NTASYITVLG ISFGSLLVIL LILCAIRWYL VRRSASRDDA AAQQATAAAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCATCAC GGCAACCGCC CTCGCCGTCT TCTTTGCCTC CGGCTCCGGC ACCGGGCACG 60
GCGGCGGTCC AGGCCCTCGC CGGCGCCGCG AGCTGCCTCC CCGCGGACCA GTCCTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000734	Aegilops tauschii	59.19	1.00e-51	195.00
IUUC-Aml-001762	Ailuropoda melanoleuca	40.00	4.00e-12	63.20
IUUC-Bta-013543	Bos taurus	40.00	3.00e-12	62.80
IUUC-Bci-013885	Botrytis cinerea	52.63	1.00e-08	52.40
IUUC-Bdi-014268	Brachypodium distachyon	56.05	3.00e-33	134.00
IUUC-Cfa-020423	Canis familiaris	40.00	3.00e-12	62.80
IUUC-Cho-024439	Choloepus hoffmanni	40.00	4.00e-12	62.80
IUUC-Dor-030265	Dipodomys ordii	40.00	4.00e-12	62.80
IUUC-Ete-032509	Echinops telfairi	38.75	2.00e-12	62.80
IUUC-Eca-033516	Equus caballus	40.00	4.00e-12	62.80
IUUC-Eeu-035261	Erinaceus europaeus	40.00	3.00e-12	62.40
IUUC-Fca-036029	Felis catus	40.00	4.00e-12	62.80
IUUC-Gmo-038484	Gadus morhua	38.75	6.00e-12	62.40
IUUC-Gma-044198	Glycine max	31.82	7.00e-20	89.70
IUUC-Hvu-047042	Hordeum vulgare	58.74	2.00e-53	201.00
IUUC-Lpe-051663	Leersia perrieri	61.50	3.00e-31	127.00
IUUC-Mlu-067557	Myotis lucifugus	40.00	4.00e-12	62.80
IUUC-Obr-076487	Oryza brachyantha	52.22	3.00e-36	143.00
IUUC-Ogu-078472	Oryza glumaepatula	53.14	9.00e-34	135.00
IUUC-Oni-082746	Oryza nivara	53.14	9.00e-34	135.00
IUUC-Opu-083778	Oryza punctata	54.31	2.00e-47	181.00
IUUC-Oru-084302	Oryza rufipogon	53.14	9.00e-34	135.00
IUUC-Osa-085834	Oryza sativa	47.79	7.00e-30	124.00
IUUC-Oar-089615	Ovis aries	40.00	4.00e-12	62.80
IUUC-Pab-098483	Pongo abelii	40.00	4.00e-12	62.80
IUUC-Sit-110097	Setaria italica	69.60	6.00e-41	159.00
IUUC-Ssc-115813	Sus scrofa	40.00	4.00e-12	62.80
IUUC-Tsy-118863	Tarsius syrichta	40.00	3.00e-12	62.40
IUUC-Tur-125998	Triticum urartu	59.64	4.00e-51	193.00
IUUC-Ttr-128337	Tursiops truncatus	40.00	4.00e-12	62.80
IUUC-Vpa-130786	Vicugna pacos	40.00	3.00e-12	62.40
IUUC-Xtr-132840	Xenopus tropicalis	40.00	3.00e-12	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence