iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114805

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G110200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g017860	Sb09g017860.1	Sb09g017860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.40e-07	30.4	118	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC  +f   ++  ++lp CgH fha C+  w       + + +CPlCr
   Q: 118  CAICIAEFadgDE-GRLLPrCGHPFHARCVDTW------FRFHTTCPLCR 160
           ********66433.667777*************......9999******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDEAMSPSPR AGGGAGGIHW EAHGRLLTAC LVALNVFLVL LVYVYFWRFF SRSRSRGGGG 60
EDDDDDASSV ASSPPASPKA RDRREVELAI TALPVFVHSS SSSGGGGGAG PAAASAECAI 120

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Nucleotide Sequence
(Fasta)

AGTAGGAGTA GAAATACTCC TATAAACGAA CCCACGCCTC CACGTCCCAC CTCCTAGATC 60
GATCCATCTC CCTAACTTCC CGTTCCGTTC CAGTCGCATT GCATGCCTCT GGATCACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g017860

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ogl-077567	Oryza glaberrima	50.24	3.00e-31	127.00
IUUC-Ogu-078175	Oryza glumaepatula	49.03	2.00e-31	127.00
IUUC-Oin-079686	Oryza indica	48.18	3.00e-22	96.30
IUUC-Oni-082724	Oryza nivara	49.76	1.00e-30	125.00
IUUC-Opu-083743	Oryza punctata	48.47	4.00e-31	127.00
IUUC-Osa-085346	Oryza sativa	49.28	4.00e-31	127.00
IUUC-Sit-110133	Setaria italica	70.73	2.00e-30	124.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence