iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000816

Ensembl Protein ID

EMT23096

UniProt Accession

M8CII3; M8CII3_AEGTA

Genbank Protein ID

EMT23096.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

KD520887

Gene Name

F775_05680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_05680	EMT23096	EMT23096

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-07	31.3	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C  +f+dg   ++lp CgH fha C+ +w         + +CPlCr
   Q: 119  CAVCIVEFRDGdlARLLPrCGHRFHAACVDAW------LHLHSTCPLCR 161
           ********88877777888*************......999*******8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MSTPQSGSAS PATTAAAAVE TSKHWAPHGP MLTACLVSIN VLMIVLIFFY FWRFFSGKRG 60
PSTPGGADEE SSSTDSSPAT SPRASRRLRD PEQPDIPSSL PVSVFDSSSE AAGKAAADCA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAACGC CCCAGAGCGG CAGCGCGAGC CCAGCGACCA CGGCGGCGGC GGCGGTAGAG 60
ACGAGCAAGC ACTGGGCGCC GCACGGCCCG ATGCTGACGG CCTGCCTCGT CAGCATCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_05680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047240	Hordeum vulgare	93.05	1.00e-64	238.00
IUUC-Oba-075233	Oryza barthii	56.76	3.00e-35	140.00
IUUC-Ogl-077455	Oryza glaberrima	58.44	3.00e-39	154.00
IUUC-Ogu-078923	Oryza glumaepatula	57.14	5.00e-37	146.00
IUUC-Oin-080000	Oryza indica	58.44	6.00e-39	153.00
IUUC-Oru-085242	Oryza rufipogon	59.09	7.00e-39	152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence