iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028366

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 108

Genbank Nucleotide ID

FP015862

Gene Name

trim108

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000061762.7	ENSDART00000088407.5	ENSDARP00000082840.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-06	29.0	9	71
E3 activity/RING/RING	2.60e-06	28.8	11	52

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPnltlrrliq 66
            +C++ l  ++dPv+l++ +++ r++I  ++  + g + cP +++p  e+dl+ +  lr++ +
   Q: 9    IKCSVCLSDFTDPVTLSCEHSFCRQCITGHMqaSLGPSACPECQKPYNEKDLKSSRLLRNMTS 71
           6899999************************6556666**********************976 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df d p++l+C H f+++C+    g+++ s +   CP C+
   Q: 11   CSVCLSDFTD-PVTLSCEHSFCRQCI---TGHMQASLGPSACPECQ 52
           **********.9**************...666789999999****7 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MHSPLSLEIK CSVCLSDFTD PVTLSCEHSF CRQCITGHMQ ASLGPSACPE CQKPYNEKDL 60
KSSRLLRNMT STVRGHLAEQ KSDRSTPQEG TQTLKLADME KMLMCSEHDE KLKLFCETDQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTTGGTTT AGGTTATTCT GCATGGCCTC AGCTGCATTC CTGTACCGTC TCCAGCTGTT 60
CCACTTCCTA TTCCTGCTTT CTCAAAAACA GCTGCGCCTC CTCCAAACAC ACTAGAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000225	Aegilops tauschii	28.87	2.00e-08	55.50
IUUC-Ame-011791	Astyanax mexicanus	56.88	3.00e-154	538.00
IUUC-Oba-075676	Oryza barthii	30.85	5.00e-10	60.50
IUUC-Ogl-077654	Oryza glaberrima	30.85	5.00e-10	60.50
IUUC-Ogu-078659	Oryza glumaepatula	30.85	5.00e-10	60.50
IUUC-Olo-080264	Oryza longistaminata	30.85	7.00e-10	60.50
IUUC-Ome-081445	Oryza meridionalis	30.85	5.00e-10	60.50
IUUC-Oni-082502	Oryza nivara	30.85	5.00e-10	60.50
IUUC-Osa-086087	Oryza sativa	30.85	5.00e-10	60.50
IUUC-Pfo-096986	Poecilia formosa	33.71	6.00e-64	238.00
IUUC-Pop-099956	Populus trichocarpa	28.28	7.00e-09	56.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence