iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017250

Ensembl Protein ID

Bra026129.1-P

UniProt Accession

M4EBH0; M4EBH0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026129	Bra026129.1	Bra026129.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-28	96.9	1060	1092
UBD/Beta-Prp	1.30e-74	252.1	1018	1270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           +v+c+ + sd  +l++G+dD+++kvW++ +g +
   Q: 1060 DVNCVTYsSDsQFLATGADDNKVKVWNVASGSC 1092
           79******999*****************99977 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrd.gtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsps 105
           +t   f + +++l+ g+++ g + vw++++++++ + +gh   v++v++s+d+++l+tg++D+ +kvw++ +g+c++t+++h++ v++l+f+++
   Q: 1018 LTTAVFNQRGNWLTFGCARlGQLLVWEWRSESYILKQQGHYFDVNCVTYSSDSQFLATGADDNKVKVWNVASGSCFITFTEHTNAVTALHFMAD 1111
           56677899********976699************************************************************************ PP
   S: 106  gdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt.vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           +++l+s+s d t+r wd + ++ +++  +++ +   +++ +p+g+++ +G+lD++ + +W+ ktg++ + l g h+ +v+ l f++  + l+s 
   Q: 1112 NHSLLSASLDGTVRAWDFRRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFeIFVWSKKTGQIKDILNG-HEAPVHGLMFSPLTQILASS 1204
           **************************999999999******************965****************9.******************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           s d+tv+lwd+ +++  ++   h+  v+ v f p+++ l+s++ Dg+i +Wd+  g l+ t+++++
   Q: 1205 SWDNTVRLWDVFASKGTVETFQHNHDVLTVTFRPDGKQLASCTLDGQIHFWDTVDGVLMYTIEGRR 1270
           ************8888888999*******************************9999999998877 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEKEISSKRP FRGIIADFKG RALCYKQDWI TGLRSGFGIL APTTYIFFAS ALPVIAFGEQ 60
LSRDTDGALS TVETLASTAL CGVIHSILGG QPLLILGVAE PTVLMYVYLY NFAKGRPELG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAAG AGATAAGCTC AAAGAGGCCT TTTAGAGGGA TCATAGCAGA TTTCAAAGGA 60
AGAGCCTTGT GTTACAAGCA AGACTGGATC ACTGGTCTCC GCTCTGGTTT CGGGTACTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011531--HCO3_transpt_C
IPR003020--HCO3_transpt_euk
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00955--HCO3_cotransp
PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005452--F:inorganic anion exchanger activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003033	Amborella trichopoda	61.43	0.00e+00	1098.00
IUUC-Bol-016040	Brassica oleracea	96.81	0.00e+00	1701.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	48.37	2.00e-180	626.00
IUUC-Mtr-058700	Medicago truncatula	72.48	0.00e+00	1348.00
IUUC-Mvi-060327	Microbotryum violaceum	43.79	0.00e+00	754.00
IUUC-Opr-070966	Ochotona princeps	50.95	2.00e-100	359.00
IUUC-Oba-075794	Oryza barthii	64.65	0.00e+00	1148.00
IUUC-Ogl-077022	Oryza glaberrima	66.03	0.00e+00	1193.00
IUUC-Ogu-078757	Oryza glumaepatula	53.85	0.00e+00	888.00
IUUC-Ome-081494	Oryza meridionalis	65.81	0.00e+00	1186.00
IUUC-Oni-082639	Oryza nivara	53.96	0.00e+00	889.00
IUUC-Oru-084883	Oryza rufipogon	53.73	0.00e+00	886.00
IUUC-Osa-086158	Oryza sativa	65.70	0.00e+00	1186.00
IUUC-Olu-087741	Ostreococcus lucimarinus	31.75	4.00e-22	96.70
IUUC-Ppa-095678	Physcomitrella patens	55.52	0.00e+00	943.00
IUUC-Ptt-103953	Puccinia triticina	36.75	8.00e-159	553.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence