iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016160

Ensembl Protein ID

Bo8g087100.1

UniProt Accession

A0A0D3DT55; A0A0D3DT55_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g087100	Bo8g087100.1	Bo8g087100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.20e-32	112.5	245	317

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelM+dPv++++G+ty+rssI+kwl+ g+ktcP+ +++l ++ l+Pn++l++li  wce+n++
   Q: 245  IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHSGLTPNYVLKSLIALWCESNGI 317
           8*********************************************************************987 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MGSTNEELMS RLVDSVKQIS KFSNSKGFFG RIQGDLVRRI TLLSPFFEEL IDIGAELNEE 60
QQLTGFEVMM IALDSSLQLF RSVNGGSKLL QIVHRGSVMQ KFHDVTVEIE AALTQIPYDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATCAA CGAATGAGGA GCTGATGAGT CGACTCGTTG ACTCCGTCAA GCAAATTTCA 60
AAGTTTTCTA ATTCCAAAGG CTTCTTCGGG AGGATCCAAG GCGATCTCGT CCGCAGGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006103	Arabidopsis lyrata	88.17	0.00e+00	1073.00
IUUC-Ath-006994	Arabidopsis thaliana	87.24	0.00e+00	1067.00
IUUC-Bdi-014691	Brachypodium distachyon	61.40	0.00e+00	640.00
IUUC-Bra-016727	Brassica rapa	98.58	0.00e+00	1197.00
IUUC-Gma-043634	Glycine max	64.89	0.00e+00	791.00
IUUC-Hvu-047272	Hordeum vulgare	61.89	0.00e+00	635.00
IUUC-Lpe-051517	Leersia perrieri	61.75	8.00e-180	623.00
IUUC-Mtr-057651	Medicago truncatula	64.16	0.00e+00	756.00
IUUC-Mac-065604	Musa acuminata	54.73	8.00e-170	590.00
IUUC-Oba-075750	Oryza barthii	61.19	0.00e+00	638.00
IUUC-Obr-076793	Oryza brachyantha	61.55	6.00e-177	613.00
IUUC-Ogl-077380	Oryza glaberrima	61.38	0.00e+00	639.00
IUUC-Ogu-078219	Oryza glumaepatula	60.82	0.00e+00	634.00
IUUC-Oin-079724	Oryza indica	56.95	0.00e+00	645.00
IUUC-Ome-081932	Oryza meridionalis	61.19	0.00e+00	637.00
IUUC-Oni-082439	Oryza nivara	61.57	0.00e+00	640.00
IUUC-Opu-083837	Oryza punctata	56.46	0.00e+00	643.00
IUUC-Oru-085172	Oryza rufipogon	61.38	0.00e+00	638.00
IUUC-Osa-085991	Oryza sativa	61.38	0.00e+00	639.00
IUUC-Pop-099229	Populus trichocarpa	67.31	0.00e+00	803.00
IUUC-Ppe-101965	Prunus persica	62.84	0.00e+00	763.00
IUUC-Sit-110461	Setaria italica	63.31	4.00e-176	610.00
IUUC-Sly-111662	Solanum lycopersicum	65.60	0.00e+00	783.00
IUUC-Stu-111979	Solanum tuberosum	65.28	0.00e+00	780.00
IUUC-Sbi-114550	Sorghum bicolor	57.76	0.00e+00	641.00
IUUC-Tca-121269	Theobroma cacao	67.09	0.00e+00	796.00
IUUC-Tae-124061	Triticum aestivum	61.40	0.00e+00	637.00
IUUC-Tur-126276	Triticum urartu	59.10	5.00e-171	593.00
IUUC-Vvi-131729	Vitis vinifera	65.53	0.00e+00	768.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence