iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005718

Ensembl Protein ID

Al_scaffold_0003_1358

UniProt Accession

D7L1C7; D7L1C7_ARALL

Genbank Protein ID

EFH59073.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348715

Gene Name

VCR; ARALYDRAFT_672161

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0003_1358	Al_scaffold_0003_1358	Al_scaffold_0003_1358

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-11	43.3	345	376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcl...af.sdtllvsGsdDgtikvW.D 29
           H ++vt+l   ++ + t+lvs+s Dgt+k+W D
   Q: 345  HDGEVTDLsmcQWmT-TRLVSSSVDGTVKIWqD 376
           899999973325655.99*************44 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASSPGNTSP HNPPPFDLST IFKPSSNPYP PPTGPFLNNQ QLYAPPGIAA QPSPVNQTQQ 60
DASSSSSATN LHPQRTLSYP TPPLNPQSPR VNHNPGTHIL ALLNNNNNGG ALANQEPSHQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCTT CACCTGGTAA TACTAGCCCT CACAATCCTC CTCCGTTCGA TCTCAGTACT 60
ATCTTCAAAC CCTCATCGAA CCCTTATCCT CCGCCTACAG GTCCTTTTCT TAACAATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_672161

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mac-065519	Musa acuminata	68.40	0.00e+00	627.00
IUUC-Oba-075599	Oryza barthii	64.38	1.00e-172	600.00
IUUC-Ogu-079010	Oryza glumaepatula	64.38	3.00e-172	598.00
IUUC-Olo-080788	Oryza longistaminata	64.33	4.00e-174	605.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence