iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121522

Ensembl Protein ID

EOY28085

UniProt Accession

A0A061GDX1; A0A061GDX1_THECC

Genbank Protein ID

EOY28085.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001884

Gene Name

TCM_029759

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_029759	EOY28085	EOY28085

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.20e-07	32.2	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  + d+  +++lp C+H+fh +C+  w         + +CP+Cr
   Q: 111  CSVCLGTITDEstVRLLPnCKHMFHVECIDTW------LGSHTTCPICR 153
           9*****996665599999**************......**********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MGREDDDEGR KFAVSRKIML AAIASLLGVV MLIILLHIYA RYLLRRQERR RRAALIYSQR 60
TQVTPIDEIS ANNEPPKSSG LDPLVIASLP TFTYKLTASS QIDDHDEPTE CSVCLGTITD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACATTAGCAA TGCAAAAAAT AGAGGAAGGT TCTTTTTTTC AGAGTAAAAT AAGAGATATA 60
TATTGAGTTA AACACCGCAC CCTCCATTGC CCTCCATTGC AGAGAAAGCC ACACTATGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005547	Arabidopsis lyrata	41.23	1.00e-30	125.00
IUUC-Ath-007071	Arabidopsis thaliana	39.47	3.00e-27	114.00
IUUC-Gma-044198	Glycine max	44.21	2.00e-43	168.00
IUUC-Hvu-047537	Hordeum vulgare	57.97	1.00e-18	85.10
IUUC-Lpe-051726	Leersia perrieri	43.44	2.00e-22	98.20
IUUC-Mac-064688	Musa acuminata	48.86	1.00e-22	100.00
IUUC-Oba-075575	Oryza barthii	34.75	5.00e-22	97.10
IUUC-Obr-076113	Oryza brachyantha	46.15	8.00e-19	86.30
IUUC-Ogl-077104	Oryza glaberrima	34.75	5.00e-22	97.10
IUUC-Ogu-078013	Oryza glumaepatula	53.42	3.00e-18	83.60
IUUC-Oin-079390	Oryza indica	34.75	5.00e-22	97.10
IUUC-Ome-081346	Oryza meridionalis	53.75	1.00e-18	87.00
IUUC-Oni-082882	Oryza nivara	34.75	5.00e-22	97.10
IUUC-Opu-083516	Oryza punctata	49.44	4.00e-19	87.80
IUUC-Pop-099366	Populus trichocarpa	54.59	1.00e-44	172.00
IUUC-Tae-124486	Triticum aestivum	44.83	1.00e-20	92.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence