iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126316

Ensembl Protein ID

TRIUR3_26437-P1

UniProt Accession

M8AQM1; M8AQM1_TRIUA

Genbank Protein ID

EMS67415.1

Protein Name

Transcription initiation factor TFIID subunit 5

Genbank Nucleotide ID

KD019442

Gene Name

TRIUR3_26437

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_26437	TRIUR3_26437-T1	TRIUR3_26437-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-37	126.0	440	478
UBD/Beta-Prp	1.10e-57	196.3	339	602

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ tg +++
   Q: 440  GHLADVDCVQWhvNCNYIATGSSDKTVRLWDVQTGECIR 478
           899*********766*********************986 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls...............tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletg 126
           + +  ++ ++ ++s+dg++ v g +D  +kvwd+                 +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w +++ 
   Q: 339  FLNTHNGLNCSSISNDGSLVVGGFSDSSVKVWDMAkigqpaktfrlwstkLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDKI 432
           56677799************************999999999999999888888899999*********************************** PP
   S: 127  qcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           q l+ + +gh + v cv++h ++n++++Gs D+tvrlWd++tg+++r + g h ++v sl+++++g++++sg++dgt+ +wdl+tg+cv  l g
   Q: 433  QPLR-IMAGHLADVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFIG-HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTGRCVSPLAG 524
           ****.*********************************************9.****************************************** PP
   S: 221  htdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlgs 284
           h++ v+s++fs ++ +l+sgs+D ++++Wd+ s++   ++  ++              +++++v  l+f++++l+ +s
   Q: 525  HNSCVWSLAFSCEGALLASGSADCTVKLWDVASSTKALKMDDTKagstnrlrllkalpTKSTPVYNLRFSGRNLLFAS 602
           ********************************9999999999989999999999999999999999999988877665 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEDEEMERKV QQYLHRKGFR LTELALQEER NRLSTTSLSD VSLSRPDNDP ARYYDGYNKL 60
RSWAYNSLDQ YKHELLRVLY PAFIHCFMDL VSEGHTLEAR AFFLKFREDH ELMHSRDLQK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACG AGGAGATGGA GAGGAAGGTG CAGCAGTACC TGCACCGCAA GGGCTTCCGC 60
CTCACCGAGC TCGCGCTGCA GGAGGAGCGC AACCGCCTCT CCACCACCTC CCTCTCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR007582--TFIID_NTD2
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0003743--F:translation initiation factor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	99.27	0.00e+00	1021.00
IUUC-Ago-007736	Ashbya gossypii	31.75	1.00e-95	343.00
IUUC-Acl-008092	Aspergillus clavatus	29.40	1.00e-79	290.00
IUUC-Afl-008659	Aspergillus flavus	29.52	1.00e-79	290.00
IUUC-Ani-009462	Aspergillus nidulans	28.93	2.00e-67	248.00
IUUC-Aor-010083	Aspergillus oryzae	29.53	1.00e-79	290.00
IUUC-Bgr-012257	Blumeria graminis	28.94	7.00e-72	264.00
IUUC-Bdi-015041	Brachypodium distachyon	80.98	0.00e+00	940.00
IUUC-Ggr-039878	Gaeumannomyces graminis	26.20	2.00e-50	192.00
IUUC-Mor-057024	Magnaporthe oryzae	25.79	1.00e-48	187.00
IUUC-Mpo-057520	Magnaporthe poae	26.64	2.00e-47	183.00
IUUC-Mac-064886	Musa acuminata	70.34	8.00e-137	480.00
IUUC-Ncr-068891	Neurospora crassa	26.74	4.00e-47	182.00
IUUC-Obr-076111	Oryza brachyantha	77.88	0.00e+00	989.00
IUUC-Ogu-078057	Oryza glumaepatula	72.93	0.00e+00	848.00
IUUC-Olo-080557	Oryza longistaminata	71.00	0.00e+00	827.00
IUUC-Ome-081831	Oryza meridionalis	74.59	0.00e+00	851.00
IUUC-Oni-082431	Oryza nivara	73.86	0.00e+00	912.00
IUUC-Opu-083239	Oryza punctata	69.85	0.00e+00	849.00
IUUC-Oru-085131	Oryza rufipogon	71.77	0.00e+00	838.00
IUUC-Olu-087616	Ostreococcus lucimarinus	35.74	8.00e-106	376.00
IUUC-Pno-094823	Phaeosphaeria nodorum	30.28	6.00e-69	254.00
IUUC-Sce-106186	Saccharomyces cerevisiae	33.08	1.00e-88	320.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	32.88	6.00e-96	343.00
IUUC-Spo-108142	Schizosaccharomyces pombe	32.05	6.00e-95	340.00
IUUC-Smo-109111	Selaginella moellendorffii	53.86	0.00e+00	630.00
IUUC-Sit-109804	Setaria italica	77.00	0.00e+00	982.00
IUUC-Sbi-114849	Sorghum bicolor	78.99	0.00e+00	1009.00
IUUC-Tae-125816	Triticum aestivum	87.14	0.00e+00	987.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence