iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095546

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2

Genbank Nucleotide ID

DS544916

Gene Name

SWDB1502; PHYPADRAFT_118964

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S27_191V6	PP1S27_191V6.1	PP1S27_191V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-21	75.7	114	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d+v +l+  +  + + sG+ D+t+++WDlrt+v+
   Q: 114  GHRDRVVSLCMsPKnDCFMSGALDHTVRLWDLRTNVC 150
           8**********9445889****************998 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEEKRGVALE LNDTVIKRMC VGAAFKDYGG RVNSLDFHRA DDLLVTASDD ESIRLYDTAN 60
ATLLKTIHSK KYGVDQICFT HHTSSVVYSS KNGWDESLRY LSLFDNRYLR YFKGHRDRVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATCACCTTT TGTTTTGTTG TTCCATTTGC TGGTTATTGA TTCACACTCA ACGCCCCGAG 60
CTCCGACGTC GAATTGCTTC CAGCGATTTT ATGTCGAGTA TGTTCAATGT GATGGAAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0489--Methyltransferase
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0008168--F:methyltransferase activity
GO:0080182--P:histone H3-K4 trimethylation

KEGG

ppp:PHYPADRAFT_118964

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000390	Aegilops tauschii	56.07	2.00e-102	364.00
IUUC-Atr-002607	Amborella trichopoda	58.64	1.00e-117	415.00
IUUC-Cel-018276	Caenorhabditis elegans	34.84	7.00e-55	206.00
IUUC-Cne-026890	Cryptococcus neoformans	31.35	3.00e-32	132.00
IUUC-Cme-027288	Cyanidioschyzon merolae	36.09	6.00e-55	207.00
IUUC-Hvu-047690	Hordeum vulgare	56.07	2.00e-102	364.00
IUUC-Oba-075229	Oryza barthii	55.70	8.00e-99	353.00
IUUC-Ogu-078068	Oryza glumaepatula	55.38	2.00e-98	351.00
IUUC-Ome-081277	Oryza meridionalis	45.89	2.00e-70	258.00
IUUC-Oni-082990	Oryza nivara	55.38	2.00e-98	352.00
IUUC-Opu-083374	Oryza punctata	54.75	4.00e-98	350.00
IUUC-Oru-084354	Oryza rufipogon	55.38	2.00e-98	352.00
IUUC-Sja-107724	Schizosaccharomyces japonicus	32.53	2.00e-43	168.00
IUUC-Sbi-114094	Sorghum bicolor	56.33	2.00e-100	357.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence