iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109403

Ensembl Protein ID

EFJ17782

UniProt Accession

D8SCX2; D8SCX2_SELML

Genbank Protein ID

EFJ17782.1

Protein Name

Putative uncharacterized protein SHL1B-1

Genbank Nucleotide ID

GL377612

Gene Name

SHL1B-1; SELMODRAFT_420725

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_420725	EFJ17782	EFJ17782

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.10e-09	37.6	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp+C++ls  +++++ e + Cp+C+s
   Q: 140  YC-KCEMPYNPDDLMVQCESCKDWFHPTCMSLS-PDQVKKLESFHCPECSS 188
           78.7*****************************.999999999******86 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAKSKVARKV VESYTIRGTH KVVKAGDTVF MRAPDPEKPS YVAKIERIEA DARNNIKVNV 60
RWYYRPEESM GGRRQFHGAK ELFLSDHFDI QSADTIEGKC TVHSFKSYTK LESVGSDDFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGT CCAAGGTTGC AAGGAAGGTT GTGGAATCCT ACACGATCAG GGGCACTCAC 60
AAGGTTGTCA AAGGTAAAGT AGTCAGTGAT TGATTGATCG ACTGCACAAA AAATCTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

KEGG

smo:SELMODRAFT_420725

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ani-009326	Aspergillus nidulans	38.78	5.00e-06	45.80
IUUC-Bol-015887	Brassica oleracea	66.67	3.00e-87	313.00
IUUC-Cre-022934	Chlamydomonas reinhardtii	45.00	2.00e-43	167.00
IUUC-Fox-037812	Fusarium oxysporum	38.46	4.00e-05	42.00
IUUC-Ggr-039960	Gaeumannomyces graminis	34.43	8.00e-07	48.10
IUUC-Kpa-049165	Komagataella pastoris	40.82	3.00e-07	48.90
IUUC-Mor-057044	Magnaporthe oryzae	43.14	3.00e-06	46.20
IUUC-Mpo-057588	Magnaporthe poae	34.43	9.00e-07	47.80
IUUC-Oba-075188	Oryza barthii	70.97	4.00e-82	296.00
IUUC-Obr-076844	Oryza brachyantha	63.64	6.00e-83	298.00
IUUC-Ogl-077260	Oryza glaberrima	63.89	3.00e-83	300.00
IUUC-Ogu-078663	Oryza glumaepatula	66.20	8.00e-85	305.00
IUUC-Oin-079894	Oryza indica	65.74	1.00e-84	304.00
IUUC-Olo-080411	Oryza longistaminata	72.58	4.00e-84	303.00
IUUC-Ome-081623	Oryza meridionalis	66.20	9.00e-85	305.00
IUUC-Oni-082587	Oryza nivara	65.74	1.00e-84	304.00
IUUC-Opu-083591	Oryza punctata	66.67	9.00e-87	311.00
IUUC-Oru-084597	Oryza rufipogon	65.28	6.00e-84	302.00
IUUC-Osa-086057	Oryza sativa	65.74	1.00e-84	304.00
IUUC-Olu-087802	Ostreococcus lucimarinus	44.05	7.00e-44	169.00
IUUC-Pop-099322	Populus trichocarpa	68.20	1.00e-88	318.00
IUUC-Sce-106421	Saccharomyces cerevisiae	44.83	7.00e-08	50.40
IUUC-Sit-110411	Setaria italica	64.81	5.00e-85	306.00
IUUC-Sbi-114186	Sorghum bicolor	65.28	1.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence