iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114815

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G221000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g028710	Sb07g028710.1	Sb07g028710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-09	36.8	99	141

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplv..lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +Cl +f+ + +v  lpCgH+fh+ Cl+ w     + + +++CPlCr
   Q: 99   CRVCLVRFEPESVVnrLPCGHLFHRACLETW-----LDYDHATCPLCR 141
           9*******7776663377*************.....89*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGISSMPAPK DSLLGFVLYN AAASVAILSG LVRAALLFLG VAAAPSSSPW EAPEEERRQQ 60
QQGAVRVTPV GPTLADRFRS RFRPSRFGRR RGCGGSGDCR VCLVRFEPES VVNRLPCGHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGAATCCT ACATTCAGCA GCACCAGCAC GGACCACTAC CATCTCAATC TCACGCACCC 60
CCCAAATTGC AACCAGGGTC CCGAGGTCCC TCCCTCCTGT CCTGGGGCCG CCAATCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g028710

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002705	Amborella trichopoda	36.81	9.00e-21	91.70
IUUC-Aly-005890	Arabidopsis lyrata	35.19	6.00e-20	89.40
IUUC-Ani-009448	Aspergillus nidulans	47.06	4.00e-10	55.50
IUUC-Bdi-014597	Brachypodium distachyon	66.67	2.00e-36	144.00
IUUC-Bol-015727	Brassica oleracea	36.84	7.00e-25	105.00
IUUC-Bra-018060	Brassica rapa	35.10	6.00e-23	98.60
IUUC-Fox-037931	Fusarium oxysporum	40.82	1.00e-09	57.40
IUUC-Gma-043724	Glycine max	37.50	1.00e-24	104.00
IUUC-Hvu-047116	Hordeum vulgare	67.13	9.00e-31	124.00
IUUC-Lpe-051313	Leersia perrieri	67.35	9.00e-43	164.00
IUUC-Mtr-058124	Medicago truncatula	37.16	1.00e-23	101.00
IUUC-Mac-064673	Musa acuminata	48.30	1.00e-22	97.80
IUUC-Oba-075151	Oryza barthii	57.53	1.00e-25	108.00
IUUC-Ogl-077775	Oryza glaberrima	67.57	2.00e-38	150.00
IUUC-Ogu-078543	Oryza glumaepatula	92.50	3.00e-19	87.00
IUUC-Oin-079546	Oryza indica	67.57	2.00e-38	150.00
IUUC-Ome-081882	Oryza meridionalis	91.11	3.00e-21	93.60
IUUC-Oni-082196	Oryza nivara	67.57	2.00e-38	150.00
IUUC-Opu-083519	Oryza punctata	67.97	1.00e-41	161.00
IUUC-Oru-084312	Oryza rufipogon	67.57	2.00e-38	150.00
IUUC-Osa-086234	Oryza sativa	67.57	2.00e-38	150.00
IUUC-Pop-099448	Populus trichocarpa	40.14	7.00e-27	112.00
IUUC-Ppe-101936	Prunus persica	33.33	5.00e-21	92.80
IUUC-Sit-110820	Setaria italica	65.03	4.00e-37	146.00
IUUC-Sly-111828	Solanum lycopersicum	56.90	1.00e-17	80.10
IUUC-Stu-112754	Solanum tuberosum	33.97	1.00e-21	94.70
IUUC-Tre-122033	Trichoderma reesei	44.90	2.00e-09	55.80
IUUC-Tvi-122438	Trichoderma virens	42.00	2.00e-09	56.20
IUUC-Tae-124964	Triticum aestivum	87.50	1.00e-25	108.00
IUUC-Vvi-131394	Vitis vinifera	37.67	2.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence