iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016098

Ensembl Protein ID

Bo4g038640.1

UniProt Accession

A0A0D3BRU4; A0A0D3BRU4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g038640	Bo4g038640.1	Bo4g038640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-07	31.0	369	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f+d+  +++ + C H fh  C+  w         + +CP+Cr
   Q: 369  CAICLSEFSDEdtVRLiTVCRHGFHSVCIDLW------FESHKTCPVCR 411
           ********55444554388*************......9999******8 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSHRRDSTTD AVHVIPTNDP PPENPFPSPV WASTEDDYSR VSAANNDETE SPCKKTRGSP 60
SSSSSSEIGK AFFKTKLCCN FRAGSCPYVA STCHFAHSAE ELRRPTAGES VRPYKGRHCK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTCATC GCAGGGATTC CACCACCGAT GCAGTCCACG TCATACCCAC CAACGACCCT 60
CCCCCGGAGA ATCCGTTTCC CAGTCCCGTA TGGGCCTCCA CTGAGGATGA TTACAGCCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50103--ZF_C3H1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13639--zf-RING_2

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005915	Arabidopsis lyrata	69.76	7.00e-85	306.00
IUUC-Ath-006837	Arabidopsis thaliana	71.77	6.00e-94	336.00
IUUC-Bra-016965	Brassica rapa	86.67	5.00e-127	446.00
IUUC-Ogl-077109	Oryza glaberrima	45.16	1.00e-21	95.50
IUUC-Ogu-078731	Oryza glumaepatula	45.16	1.00e-21	95.90
IUUC-Oin-079688	Oryza indica	45.16	3.00e-21	93.20
IUUC-Olo-080350	Oryza longistaminata	43.62	5.00e-20	90.50
IUUC-Oni-082969	Oryza nivara	45.16	1.00e-21	95.50
IUUC-Opu-083793	Oryza punctata	53.42	1.00e-19	89.00
IUUC-Oru-084314	Oryza rufipogon	45.16	1.00e-21	95.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence