iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114502

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G164200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g015000	Sb03g015000.1	Sb03g015000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	3.70e-153	512.3	38	647

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 15   vkkeyeelytavynlclsk....vgaklYkklkevleefi.kqvkkkveesedeqlLktynreWekfreqlkvlrkifayldrtyvkkskkvsevr 105
           + ++y+ lyt +yn+c++k    ++++lY+k +e  ee+i   v  +  e++de +L+ +++ W +++  +  l + f yldr+++++ +++ + r
   Q: 38   SSEDYMMLYTTIYNMCTQKpphdYSQQLYEKYRESFEEYItSMVLPSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFISR-RSLPPLR 132
           4789***************9*99*****************777899999999999*********************************.9****** PP
   S: 106  kLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqefykaesaeflqenevdeYlkkve 201
           +++l  +r+ + ++ik ++  +++ li +eR+ge++dr ll++v   +ve++l + + y+++FE   l+ t+ +y+ ++++ + e ++ +Y+ k+e
   Q: 133  EVGLSCFRDLVYQEIKGKVKSAVISLIDREREGEQIDRALLKNVLDIFVEIGLGTMECYENDFEDFLLKDTADYYSIKAQSWILEDSCPDYMLKAE 228
           ************************************************************************************************ PP
   S: 202  arlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrvlngleellkeleshikeqgkaaltaeek 293
           + l+ e+er+++yl++s+e+kLle+v++el+++++ +ll    ++++allrd+k edlsrmy+L+sr++ gle++ + +++h+ ++g+a++ ++e 
   Q: 229  ECLKREKERVSHYLHSSSEQKLLEKVQHELLTQYASQLLekehSGCHALLRDDKVEDLSRMYRLFSRITRGLEPVSQIFKQHVTNEGTALVKQAED 324
           **************************************999999************************************************5444 PP
   S: 294  ek.............dpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks.skglteeeleaq 375
           +              + + +V++++el++k+   v e+F+  + F kal++afe f nk   ++ + s+EllA ++D+ L+k+ s +l +e +e++
   Q: 325  AAsnkkpekkdmvglQEQIFVRKIIELHDKYVAYVTECFQGHTLFHKALKEAFEVFCNKG--VSGSSSAELLATFCDNILKKGgSEKLSDEAIEDT 418
           4446788999999997799*****************************************..88999***************************** PP
   S: 376  ldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrqFkee.kenteesesvelsvlv 470
           l+kv+ ++ yis+kd+F ++Y+k La+RLl +ksa +e E+s+++kLk++cg +ftsk+e+M++dl v +d +++F+e   ++ e +++++l v v
   Q: 419  LEKVVRLLAYISDKDLFAEFYRKKLARRLLFDKSANDEHERSILTKLKQQCGGQFTSKMEGMVTDLTVARDHQTKFEEFiSSHPELNPGIDLAVTV 514
           *****************************************************************************7526778899********* PP
   S: 471  LsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpee 566
           L++g+Wp + +   ++LP+e+ k +e f+efY+ + ++RkL++ ++lg++++ a++++++ el V+t+Q+a+LL+fn  +++s+ e+  + +l+++
   Q: 515  LTTGFWPSYKSFD-INLPSEMVKCVEVFKEFYQTRTKHRKLTLIYSLGTCNISAKFEAKTIELIVTTYQAALLLLFNGADRLSYSEIVTQLNLSDD 609
           *********7755.********************************************************************************** PP
   S: 567  eLrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
           +  r l sL + k ++l+kep++++i+ +d+f  N++f
   Q: 610  DVVRLLHSLSCAKYDILNKEPNNRSIAPNDVFEYNSKF 647
           ***********************************998 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MATHERKTID LEQGWEFMQK GITKLKNILE GKPEPQFSSE DYMMLYTTIY NMCTQKPPHD 60
YSQQLYEKYR ESFEEYITSM VLPSLREKHD EFMLRELVKR WSNHKVMVRW LSRFFHYLDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCCATCTC GCGTCGCGTG GGAAGCCGCC GCCCACGCCG CGAAGCCAGC GAAGCAGCTC 60
GTTACCTACC TCTCCCGACG TTGCCCCCTG CCGTGGATCG GGTTGGCCTC TCCGGCGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_03g015000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002822	Amborella trichopoda	84.14	0.00e+00	1296.00
IUUC-Aly-005410	Arabidopsis lyrata	80.54	0.00e+00	1238.00
IUUC-Ath-006626	Arabidopsis thaliana	80.81	0.00e+00	1238.00
IUUC-Bdi-014240	Brachypodium distachyon	95.56	0.00e+00	1452.00
IUUC-Bol-016015	Brassica oleracea	80.00	0.00e+00	1231.00
IUUC-Cre-022585	Chlamydomonas reinhardtii	64.11	0.00e+00	958.00
IUUC-Csv-026083	Ciona savignyi	31.91	1.00e-105	376.00
IUUC-Gma-044070	Glycine max	85.75	0.00e+00	1323.00
IUUC-Hvu-047383	Hordeum vulgare	95.56	0.00e+00	1454.00
IUUC-Lpe-051606	Leersia perrieri	95.40	0.00e+00	1428.00
IUUC-Mtr-057953	Medicago truncatula	84.86	0.00e+00	1302.00
IUUC-Mac-065440	Musa acuminata	88.44	0.00e+00	1358.00
IUUC-Oba-075744	Oryza barthii	95.83	0.00e+00	1451.00
IUUC-Obr-076289	Oryza brachyantha	95.49	0.00e+00	1417.00
IUUC-Ogu-078249	Oryza glumaepatula	95.20	0.00e+00	1447.00
IUUC-Olo-080532	Oryza longistaminata	95.33	0.00e+00	1449.00
IUUC-Ome-081358	Oryza meridionalis	95.33	0.00e+00	1449.00
IUUC-Oni-082083	Oryza nivara	95.33	0.00e+00	1449.00
IUUC-Opu-083214	Oryza punctata	96.24	0.00e+00	1456.00
IUUC-Oru-085124	Oryza rufipogon	95.33	0.00e+00	1449.00
IUUC-Osa-085572	Oryza sativa	96.10	0.00e+00	1456.00
IUUC-Olu-087721	Ostreococcus lucimarinus	54.64	0.00e+00	815.00
IUUC-Ppa-095760	Physcomitrella patens	81.81	0.00e+00	1258.00
IUUC-Pop-100087	Populus trichocarpa	87.63	0.00e+00	1313.00
IUUC-Pca-100242	Procavia capensis	33.60	1.00e-74	273.00
IUUC-Ppe-101405	Prunus persica	86.69	0.00e+00	1338.00
IUUC-Pte-104257	Pyrenophora teres	30.43	1.00e-97	350.00
IUUC-Smo-109541	Selaginella moellendorffii	80.98	0.00e+00	1182.00
IUUC-Sly-111067	Solanum lycopersicum	86.77	0.00e+00	1331.00
IUUC-Stu-112374	Solanum tuberosum	80.22	0.00e+00	1184.00
IUUC-Tca-121586	Theobroma cacao	86.69	0.00e+00	1302.00
IUUC-Tae-125618	Triticum aestivum	91.97	0.00e+00	1437.00
IUUC-Tur-126475	Triticum urartu	85.71	0.00e+00	1361.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence