iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mac-065234

Ensembl Protein ID

GSMUA_AchrUn_randomP16010_001

UniProt Accession

M0U9L0; M0U9L0_MUSAM

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSMUA_AchrUn_randomG16010_001	GSMUA_AchrUn_randomT16010_001	GSMUA_AchrUn_randomP16010_001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-22	78.3	606	635
UBD/Beta-Prp	1.10e-40	140.5	562	694

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  +t+++f ++ ++l+++s D+t++vWD
   Q: 606  HTLLITDVRFsPSmPRLATSSFDKTVRVWD 635
           7888*******777**************** PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdlet.gq 127
              +++v ++ fs+dgk+l+tg+ D+ + +w  +t k  +tl++h+  +++++fsps  +l++ s d+t+rvwd ++ g+
   Q: 562  RASTNKVVCCHFSSDGKLLATGGHDKKAVLWHADTLKSESTLEEHTLLITDVRFSPSMPRLATSSFDKTVRVWDADNpGY 641
           23333466666666666666666666666666666666666666666666666666666666666666666666665344 PP
   S: 128  cleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvkl 206
            l+ t++gh+++v+++ +hp++ +l+ s+  D+ +r W++++g++ r + g                             
   Q: 642  SLR-TFTGHSASVMSLDFHPSKeDLICSCDSDGEMRYWSINNGNCARVFPG----------------------------- 691
           444.66666666666666666666666666666666666666666666644............................. PP
   S: 207  wdlqtgecvrtlnghtd 223
                          t+
   Q: 692  --------------GTT 694
           ..............333 PP

Organism

Musa acuminata

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIYDYL MKRGLQAAAK AFQAEAKVSS DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSDAAASYIE TQHLKAREQQ QQQLQAQQQQ QHQQQQQQPQ RREGSQLLNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCAGA CCAATTGGGA GGCCGATAAG ATGTGAGCTA CTGTTTCTTT TGCTCGAATT 60
TTGACGAGTT TTTTGGGCTT TGTGGACGAT AGACTCGCTT GATTGACCTC GCTTAGGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000855	Aegilops tauschii	61.61	0.00e+00	850.00
IUUC-Atr-002973	Amborella trichopoda	67.81	0.00e+00	926.00
IUUC-Bdi-015034	Brachypodium distachyon	62.81	0.00e+00	902.00
IUUC-Bra-017088	Brassica rapa	63.55	0.00e+00	915.00
IUUC-Lpe-051125	Leersia perrieri	63.03	0.00e+00	846.00
IUUC-Olo-080338	Oryza longistaminata	61.66	0.00e+00	678.00
IUUC-Ome-081901	Oryza meridionalis	62.75	0.00e+00	743.00
IUUC-Sit-109866	Setaria italica	63.33	0.00e+00	785.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence