iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109607

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377609

Gene Name

SELMODRAFT_112245

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_112245	EFJ18641	EFJ18641

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-25	88.6	675	704
UBD/Beta-Prp	2.80e-47	162.0	624	760

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht  +t+++f ++ t+l+++s D+t++vWD
   Q: 675  HTFLITDVRFsPNsTRLATSSFDKTVRVWD 704
           66679******777**************** PP

UBD/Beta-Prp

   S: 42   gkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvnc 142
           g  + +l   +++v ++ fs+dgk+l++++ D+ + +w+++t k  +tl++h++ +++++fsp++ +l++ s d+t+rvwd ++ + +  t++gh+ +v++
   Q: 624  GFEVGCLRASTSKVVCCHFSSDGKLLASAGHDKKAVLWNMDTLKLKSTLEEHTFLITDVRFSPNSTRLATSSFDKTVRVWDADNPSYSLRTFTGHQTSVMS 724
           4456777778888***********************************************************************888888*********** PP
   S: 143  vvvhpdg.nllvsGslDrtvrlWdlktgkllrtltg 177
           + +hp + +ll s+  D+ +r W++++g + r ++g
   Q: 725  LDFHPVNeDLLCSCDGDSEIRYWSVSQGVCTRVFKG 760
           **********************************88 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIHDYL VKKNLQASAK AFQTEGKVSG DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE TQQLKAREQQ QQHQHLQHQQ QQQQIQQQQH QQQHQQQLQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAAA GTAACTGGGA AGCCGATAAG ATGTAAGCGT TTGGATTTCT TTTTGTTCTT 60
CTCGTTGTTT GAGTAAGATT GGGATTCGCA GGCTCGATGT TTATATACAC GACTATCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG

smo:SELMODRAFT_112245

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051536	Leersia perrieri	51.65	2.00e-166	578.00
IUUC-Ome-081901	Oryza meridionalis	59.09	5.00e-131	462.00
IUUC-Oru-084538	Oryza rufipogon	59.03	7.00e-132	464.00
IUUC-Pop-098994	Populus trichocarpa	57.91	0.00e+00	716.00
IUUC-Sit-109866	Setaria italica	50.27	3.00e-169	588.00
IUUC-Sly-110921	Solanum lycopersicum	57.22	0.00e+00	658.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence