iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126582

Ensembl Protein ID

TRIUR3_10843-P1

UniProt Accession

M7YUB6; M7YUB6_TRIUA

Genbank Protein ID

EMS51127.1

Protein Name

Nucleoporin SEH1

Genbank Nucleotide ID

KD224077

Gene Name

TRIUR3_10843

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_10843	TRIUR3_10843-T1	TRIUR3_10843-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-09	37.5	118	149

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd..tllvsGsdDgtikvWD 29
           H+  + ++ +  +d  + +++ + Dgt+ +W+
   Q: 118  HEHAIAAVVWlpPDygDAIACVCADGTLSLWE 149
           899999999**9878888*************7 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MKAVHINRLN VVIILICVRF FEFVTVDAAP WWAKCPPPAF PDCIPEEDNS SDGDSEGADH 60
ACLPPEPFEP VIEKSGVKTR SSEQAMIPVE AYISMVKGSS SEEDSETGDQ SYIPPEAHEH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGCGG TACATATAAA CAGATTAAAT GTAGTCATCA TACTTATATG TGTAAGATTC 60
TTTGAATTCG TAACAGTAGG TAAATTGGTA ATTTCACTAG CGAAAATATA TGTATGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	65.52	1.00e-82	297.00
IUUC-Apl-003654	Anas platyrhynchos	30.10	2.00e-26	112.00
IUUC-Aca-004378	Anolis carolinensis	29.49	7.00e-26	110.00
IUUC-Aly-005963	Arabidopsis lyrata	58.63	1.00e-98	352.00
IUUC-Ath-007107	Arabidopsis thaliana	59.35	2.00e-99	354.00
IUUC-Bdi-014594	Brachypodium distachyon	82.03	2.00e-144	504.00
IUUC-Bol-016565	Brassica oleracea	57.91	2.00e-97	347.00
IUUC-Bra-017831	Brassica rapa	57.91	7.00e-98	349.00
IUUC-Cho-024660	Choloepus hoffmanni	29.13	2.00e-25	108.00
IUUC-Eca-033425	Equus caballus	28.62	2.00e-24	105.00
IUUC-Fal-037234	Ficedula albicollis	30.51	4.00e-26	113.00
IUUC-Gma-044300	Glycine max	60.79	5.00e-104	369.00
IUUC-Hvu-047455	Hordeum vulgare	87.95	6.00e-156	542.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	28.95	1.00e-24	105.00
IUUC-Lch-050466	Latimeria chalumnae	27.12	4.00e-26	111.00
IUUC-Lpe-051064	Leersia perrieri	79.03	1.00e-141	494.00
IUUC-Meu-055958	Macropus eugenii	26.87	1.00e-15	76.60
IUUC-Mtr-057876	Medicago truncatula	57.30	6.00e-97	346.00
IUUC-Mla-058820	Melampsora laricipopulina	24.34	2.00e-13	68.60
IUUC-Mga-059348	Meleagris gallopavo	30.10	2.00e-26	112.00
IUUC-Mac-064960	Musa acuminata	65.71	2.00e-109	387.00
IUUC-Nle-068977	Nomascus leucogenys	29.45	3.00e-26	111.00
IUUC-Oan-073098	Ornithorhynchus anatinus	29.77	6.00e-27	113.00
IUUC-Oba-075325	Oryza barthii	76.92	1.00e-126	445.00
IUUC-Obr-076089	Oryza brachyantha	83.57	8.00e-142	495.00
IUUC-Ogl-077279	Oryza glaberrima	83.22	1.00e-141	494.00
IUUC-Ogu-078901	Oryza glumaepatula	76.57	3.00e-126	443.00
IUUC-Oin-079385	Oryza indica	83.86	5.00e-142	496.00
IUUC-Ome-081809	Oryza meridionalis	83.92	7.00e-144	503.00
IUUC-Oni-082185	Oryza nivara	73.43	6.00e-119	419.00
IUUC-Opu-083324	Oryza punctata	80.07	5.00e-133	466.00
IUUC-Oru-084801	Oryza rufipogon	83.92	1.00e-142	498.00
IUUC-Osa-085790	Oryza sativa	83.22	1.00e-141	494.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.27	5.00e-10	57.80
IUUC-Oar-090298	Ovis aries	28.97	2.00e-23	105.00
IUUC-Psi-093508	Pelodiscus sinensis	30.17	2.00e-26	112.00
IUUC-Ppa-095228	Physcomitrella patens	44.29	2.00e-67	248.00
IUUC-Pop-099015	Populus trichocarpa	59.64	1.00e-101	361.00
IUUC-Ppe-101303	Prunus persica	62.90	2.00e-106	377.00
IUUC-Rno-104895	Rattus norvegicus	29.83	1.00e-28	122.00
IUUC-Sha-106829	Sarcophilus harrisii	29.45	7.00e-27	113.00
IUUC-Smo-108721	Selaginella moellendorffii	42.18	4.00e-61	226.00
IUUC-Sit-110393	Setaria italica	75.82	3.00e-134	470.00
IUUC-Sly-111125	Solanum lycopersicum	62.59	1.00e-104	372.00
IUUC-Stu-112745	Solanum tuberosum	54.55	6.00e-100	356.00
IUUC-Sar-113279	Sorex araneus	28.62	8.00e-24	103.00
IUUC-Sbi-114110	Sorghum bicolor	78.32	1.00e-133	468.00
IUUC-Ssc-115589	Sus scrofa	28.53	1.00e-25	109.00
IUUC-Tru-117985	Takifugu rubripes	28.52	1.00e-24	108.00
IUUC-Tsy-118913	Tarsius syrichta	28.91	2.00e-22	98.60
IUUC-Tca-120999	Theobroma cacao	53.29	1.00e-93	337.00
IUUC-Tae-122796	Triticum aestivum	91.53	4.00e-161	559.00
IUUC-Tbe-127344	Tupaia belangeri	27.06	8.00e-15	73.90
IUUC-Ttr-128347	Tursiops truncatus	28.95	2.00e-24	105.00
IUUC-Vpa-130656	Vicugna pacos	28.95	5.00e-24	104.00
IUUC-Vvi-131103	Vitis vinifera	62.63	8.00e-107	379.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence