iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113870

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G339400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g038350	Sb03g038350.1	Sb03g038350.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-09	38.8	91	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+ ++      ++ ++ pCgHv+hadC+  w       +++++CP+Cr
   Q: 91   CAICKARLadaswGRCRRLRPCGHVYHADCISLW------LQRKWICPVCR 135
           ********7776733356789*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAGAIFLGVL AGLVVLICTI VCAVRHCQDG AGSAKVGGGG GVSSPAGKQE ALLNKNKNKD 60
DVDVVVAVPH QPGGAAGKRG PEPSDGDVDL CAICKARLAD ASWGRCRRLR PCGHVYHADC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGGTG CGATATTTCT AGGCGTCCTC GCGGGTCTCG TGGTGCTCAT CTGCACCATC 60
GTCTGTGCCG TGCGCCATTG CCAGGACGGC GCGGGAAGCG CGAAGGTCGG CGGCGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_03g038350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000674	Aegilops tauschii	70.27	6.00e-12	62.00
IUUC-Bdi-014053	Brachypodium distachyon	71.67	1.00e-20	90.90
IUUC-Lpe-051656	Leersia perrieri	59.32	3.00e-14	69.70
IUUC-Oin-080010	Oryza indica	62.50	4.00e-19	85.90
IUUC-Olo-081081	Oryza longistaminata	62.50	4.00e-19	85.90
IUUC-Ome-081423	Oryza meridionalis	62.50	4.00e-19	85.90
IUUC-Oni-083030	Oryza nivara	62.50	4.00e-19	85.90
IUUC-Opu-083261	Oryza punctata	71.43	3.00e-17	79.30
IUUC-Sit-109767	Setaria italica	74.60	7.00e-25	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence