iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080647

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN540829.1_FG001	KN540829.1_FGT001	KN540829.1_FGP001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-09	36.4	129	171

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f++g  ++ lp CgH fh +C+ +w       + + +CPlCr
   Q: 129  CSICLGEFEEGekVKALPlCGHGFHPECVDAW------LRSRPSCPLCR 171
           ********6655599999**************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAAAQDASSQ AALGLRWRYG DVDDGNFAVR GRAVPLLVAL LFVLVCFVAV SLYLRWACRC 60
HRYGRDTTPM PTTTSSGFSS SHAAATAPGS ASSVTGLDDA TIASMPVALH RAAVASGAGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCAG CGCAGGACGC GTCGTCCCAG GCGGCGTTGG GGCTCCGGTG GCGCTACGGC 60
GACGTCGACG ACGGCAACTT CGCGGTGCGC GGCCGCGCGG TGCCGCTCCT CGTGGCGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	38.51	1.00e-22	98.20
IUUC-Aly-006564	Arabidopsis lyrata	36.88	6.00e-20	89.00
IUUC-Bdi-014573	Brachypodium distachyon	54.75	3.00e-31	126.00
IUUC-Bra-017408	Brassica rapa	33.33	2.00e-11	60.50
IUUC-Gma-043502	Glycine max	34.86	7.00e-22	95.50
IUUC-Hvu-047069	Hordeum vulgare	47.54	3.00e-20	90.50
IUUC-Lpe-051629	Leersia perrieri	67.80	6.00e-39	152.00
IUUC-Mtr-058498	Medicago truncatula	32.77	1.00e-22	98.20
IUUC-Mac-064429	Musa acuminata	39.31	2.00e-22	97.40
IUUC-Oba-075191	Oryza barthii	96.65	3.00e-56	209.00
IUUC-Obr-076860	Oryza brachyantha	63.39	5.00e-38	149.00
IUUC-Ogl-077584	Oryza glaberrima	96.65	3.00e-56	209.00
IUUC-Ogu-078773	Oryza glumaepatula	96.65	3.00e-56	209.00
IUUC-Oin-080112	Oryza indica	96.09	1.00e-54	204.00
IUUC-Ome-081611	Oryza meridionalis	96.65	1.00e-55	208.00
IUUC-Oni-082108	Oryza nivara	95.53	1.00e-54	204.00
IUUC-Opu-083607	Oryza punctata	82.68	2.00e-56	210.00
IUUC-Oru-084593	Oryza rufipogon	96.65	3.00e-56	209.00
IUUC-Osa-086279	Oryza sativa	96.65	3.00e-56	209.00
IUUC-Ppe-101926	Prunus persica	55.00	8.00e-19	85.50
IUUC-Sit-110425	Setaria italica	58.56	9.00e-39	152.00
IUUC-Stu-112860	Solanum tuberosum	34.16	5.00e-19	85.90
IUUC-Sbi-114315	Sorghum bicolor	52.22	2.00e-31	127.00
IUUC-Tca-121482	Theobroma cacao	36.88	7.00e-21	93.20
IUUC-Tae-124802	Triticum aestivum	52.07	8.00e-25	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence