iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017668

Ensembl Protein ID

Bra010914.1-P

UniProt Accession

M4D361; M4D361_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra010914	Bra010914.1	Bra010914.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-31	108.1	279	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+e++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q+l++  l+Pn+ +++li++wce+n++
   Q: 279  PPDELRCPISLQLMYDPVIIASGQTYERLCIEKWFSDGHNTCPKTQQELSHLCLTPNYCVKALISSWCEQNGV 351
           69********************************************************************987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDVNEVEESF FAPGDAKLHG EMCNALSVIY CKIMSVFPSL EAARPRSKSG IQALCSLHVV 60
LEKVKNILRH CTESSKLYLA ITGDSVVLKF EKAKTSLIDS LRRVEDIVQQ SIGSQILEII 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTTA ACGAAGTTGA AGAAAGTTTC TTTGCTCCTG GTGATGCCAA GGTATCTGAA 60
TCAGACTCTT TTTTTTTTCT TCTTCCCAGT AAGTTTATTG ATATTTTTTT TTTCTTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	55.42	0.00e+00	774.00
IUUC-Aly-005662	Arabidopsis lyrata	91.18	0.00e+00	1353.00
IUUC-Ath-006967	Arabidopsis thaliana	90.79	0.00e+00	1327.00
IUUC-Bdi-014509	Brachypodium distachyon	53.96	0.00e+00	757.00
IUUC-Bol-015443	Brassica oleracea	98.69	0.00e+00	1474.00
IUUC-Hvu-047761	Hordeum vulgare	55.40	0.00e+00	760.00
IUUC-Lpe-051154	Leersia perrieri	54.61	0.00e+00	776.00
IUUC-Oba-075037	Oryza barthii	55.43	0.00e+00	796.00
IUUC-Ogl-077029	Oryza glaberrima	55.43	0.00e+00	796.00
IUUC-Oin-079566	Oryza indica	55.12	0.00e+00	794.00
IUUC-Ome-081577	Oryza meridionalis	54.99	0.00e+00	793.00
IUUC-Opu-083186	Oryza punctata	55.12	0.00e+00	793.00
IUUC-Sit-109865	Setaria italica	55.80	0.00e+00	812.00
IUUC-Sly-110840	Solanum lycopersicum	62.84	0.00e+00	898.00
IUUC-Stu-112347	Solanum tuberosum	63.43	0.00e+00	893.00
IUUC-Sbi-114310	Sorghum bicolor	54.72	0.00e+00	786.00
IUUC-Tae-123152	Triticum aestivum	56.03	0.00e+00	788.00
IUUC-Tur-126692	Triticum urartu	52.40	0.00e+00	660.00
IUUC-Vvi-131273	Vitis vinifera	69.07	0.00e+00	1048.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence