iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051154

Ensembl Protein ID

LPERR01G35260.1

UniProt Accession

A0A0D9V941; A0A0D9V941_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR01G35260	LPERR01G35260.1	LPERR01G35260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.10e-31	108.1	293	364

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +pee++CpIsl+lM dPv+++sG+ty+r +Iekw+++g++tcP+t+q l++ +l+Pn+ +++li +wce+n+
   Q: 293  PPEELRCPISLQLMYDPVIISSGQTYERICIEKWFNDGHSTCPKTQQLLSHLSLTPNYCVKALIASWCEQND 364
           59********************************************************************97 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MDAMEVEEGP FLANDAKLHA GMCRAFNPAV SKLLVIFPFI EASRPRSKSG IQALCSLHVA 60
LDKAKGLLQH CADCSRLYLA ITAETVLLKF EKARTQLQDS LRRVEGIVTE EIGCKIVEIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCAA TGGAAGTGGA GGAAGGTCCT TTTCTGGCTA ATGATGCCAA GGTATCATCC 60
TGACAGTGCT TTTATCTTGG TGGCAATGAG AATGTATATC TGTTCCTGAC TTCCTGTTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000843	Aegilops tauschii	83.85	0.00e+00	1300.00
IUUC-Atr-002816	Amborella trichopoda	52.61	0.00e+00	700.00
IUUC-Aly-005662	Arabidopsis lyrata	55.38	0.00e+00	790.00
IUUC-Ath-006967	Arabidopsis thaliana	54.91	0.00e+00	786.00
IUUC-Bdi-014509	Brachypodium distachyon	85.57	0.00e+00	1294.00
IUUC-Bol-015443	Brassica oleracea	55.19	0.00e+00	805.00
IUUC-Bra-017668	Brassica rapa	55.68	0.00e+00	806.00
IUUC-Gma-043476	Glycine max	57.53	0.00e+00	830.00
IUUC-Hvu-047761	Hordeum vulgare	84.02	0.00e+00	1249.00
IUUC-Mtr-058026	Medicago truncatula	57.25	0.00e+00	798.00
IUUC-Mac-064644	Musa acuminata	50.19	0.00e+00	672.00
IUUC-Oba-075037	Oryza barthii	94.36	0.00e+00	1478.00
IUUC-Obr-076068	Oryza brachyantha	93.98	0.00e+00	1432.00
IUUC-Ogl-077029	Oryza glaberrima	94.36	0.00e+00	1478.00
IUUC-Ogu-078230	Oryza glumaepatula	94.35	0.00e+00	1476.00
IUUC-Oin-079566	Oryza indica	94.86	0.00e+00	1481.00
IUUC-Olo-080879	Oryza longistaminata	91.67	0.00e+00	1354.00
IUUC-Ome-081577	Oryza meridionalis	94.74	0.00e+00	1479.00
IUUC-Oni-082610	Oryza nivara	94.60	0.00e+00	1474.00
IUUC-Opu-083186	Oryza punctata	94.49	0.00e+00	1482.00
IUUC-Oru-084375	Oryza rufipogon	94.24	0.00e+00	1442.00
IUUC-Osa-085376	Oryza sativa	94.38	0.00e+00	1442.00
IUUC-Ppa-095879	Physcomitrella patens	35.03	1.00e-119	423.00
IUUC-Pop-100088	Populus trichocarpa	56.84	0.00e+00	873.00
IUUC-Ppe-101913	Prunus persica	57.51	0.00e+00	880.00
IUUC-Sit-109865	Setaria italica	86.48	0.00e+00	1371.00
IUUC-Sly-110840	Solanum lycopersicum	54.85	0.00e+00	776.00
IUUC-Stu-112347	Solanum tuberosum	54.86	0.00e+00	772.00
IUUC-Sbi-114310	Sorghum bicolor	86.16	0.00e+00	1338.00
IUUC-Tca-121734	Theobroma cacao	58.63	0.00e+00	875.00
IUUC-Tae-123152	Triticum aestivum	85.84	0.00e+00	1304.00
IUUC-Tur-126692	Triticum urartu	79.95	0.00e+00	1122.00
IUUC-Vvi-131273	Vitis vinifera	57.76	0.00e+00	885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence