iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112915

Ensembl Protein ID

PGSC0003DMT400015453

UniProt Accession

M1A622; M1A622_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006033	PGSC0003DMT400015453	PGSC0003DMT400015453

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-25	87.7	151	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sdtll.vsGsdDgtikvWDlrtgv 34
           +v+++++  sd+ l +sGsdDgt+++WD+r+g+
   Q: 151  RVWSIDYchSDPVLgASGSDDGTMQMWDPRCGD 183
           599***999889999**************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MTDISSILHQ DQEEEKARCE WDFHLSTIIS SCNSLSGSGC DTIGVLEFDP CGNFLASGGI 60
ARKIRIYAVK SLLQEREEGE KRTSTGAPLA LDHGNACDFF MCTPAKLGSL KWKPGLGGRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTTTTAA TCTCCCCTTC TTTACACTAT ACTACTCAAA TTCATTAATC CATCAAACTA 60
TATAGTATAA TTATATTCTT GTTTAATTTC CAAAAAAAAA TTATGTTTTG CACTAACAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sot:102602733

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	45.21	8.00e-91	326.00
IUUC-Aly-005431	Arabidopsis lyrata	58.26	6.00e-115	405.00
IUUC-Ath-006939	Arabidopsis thaliana	58.26	4.00e-111	393.00
IUUC-Bdi-014616	Brachypodium distachyon	43.02	7.00e-63	233.00
IUUC-Bol-016424	Brassica oleracea	57.42	1.00e-105	374.00
IUUC-Bra-016672	Brassica rapa	56.75	1.00e-112	398.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	32.06	9.00e-43	165.00
IUUC-Ogl-077687	Oryza glaberrima	41.36	6.00e-62	229.00
IUUC-Oin-079632	Oryza indica	40.62	2.00e-60	225.00
IUUC-Ome-081923	Oryza meridionalis	40.36	3.00e-58	217.00
IUUC-Oni-082448	Oryza nivara	40.62	1.00e-60	226.00
IUUC-Opu-083787	Oryza punctata	42.74	3.00e-73	267.00
IUUC-Oru-085278	Oryza rufipogon	40.36	3.00e-58	217.00
IUUC-Ppa-095874	Physcomitrella patens	34.03	2.00e-62	233.00
IUUC-Pop-099510	Populus trichocarpa	62.85	4.00e-134	469.00
IUUC-Ppe-102088	Prunus persica	59.78	5.00e-124	436.00
IUUC-Smo-109270	Selaginella moellendorffii	31.76	3.00e-58	218.00
IUUC-Sly-111536	Solanum lycopersicum	89.46	0.00e+00	687.00
IUUC-Tca-120952	Theobroma cacao	62.53	3.00e-139	487.00
IUUC-Tae-123036	Triticum aestivum	40.69	5.00e-65	240.00
IUUC-Vvi-131711	Vitis vinifera	60.73	2.00e-120	425.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence