iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114644

UUCD1 version

UUC-SoB-01551

Ensembl Protein ID

Sb04g001680.1

UniProt Accession

A0A194YM88; A0A194YM88_SORBI

Genbank Protein ID

KXG29317.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G017800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g001680	Sb04g001680.1	Sb04g001680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.20e-55	185.8	5	139

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+ kelk+l++dpp+++sa+pv++ d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  e+Wspal
   Q: 5    RIIKELKDLQRDPPTSCSAGPVSD-DMFHWQATIIGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILK--EQWSPAL 97
           899*********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +v++vlls++sll++pnp++pl  e+a+++k++r +y++++r
   Q: 98   TVSKVLLSVCSLLTDPNPDDPLVPEIAHMCKTDRLRYESTAR 139
           **************************************9886 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALRRIIKEL KDLQRDPPTS CSAGPVSDDM FHWQATIIGP SDSPYSGGVF LVTIHFPPDY 60
PFKPPKVAFK TKVFHPNINS NGNICLDILK EQWSPALTVS KVLLSVCSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACCGACAAC ATCAGCAGCA GCAGAAGTTG CAAGGAGATC GACGCTCTTG AGTTCTTGAA 60
TTGTTGTTGA TCGATGGCGC TGAGGAGAAT CATCAAGGAG CTCAAGGACC TGCAGAGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000324	Aegilops tauschii	84.34	7.00e-79	285.00
IUUC-Hvu-047354	Hordeum vulgare	93.96	5.00e-82	295.00
IUUC-Lpe-051317	Leersia perrieri	95.27	8.00e-84	301.00
IUUC-Mac-064642	Musa acuminata	89.19	3.00e-79	286.00
IUUC-Oba-075063	Oryza barthii	95.95	6.00e-84	301.00
IUUC-Obr-076691	Oryza brachyantha	95.95	2.00e-84	304.00
IUUC-Ogl-077418	Oryza glaberrima	95.95	6.00e-84	301.00
IUUC-Ogu-078890	Oryza glumaepatula	95.95	6.00e-84	301.00
IUUC-Olo-080885	Oryza longistaminata	95.95	6.00e-84	301.00
IUUC-Ome-081920	Oryza meridionalis	95.95	6.00e-84	301.00
IUUC-Oni-082139	Oryza nivara	95.95	6.00e-84	301.00
IUUC-Opu-083548	Oryza punctata	95.95	6.00e-84	301.00
IUUC-Oru-084951	Oryza rufipogon	95.95	6.00e-84	301.00
IUUC-Osa-085525	Oryza sativa	95.95	6.00e-84	301.00
IUUC-Sit-109964	Setaria italica	97.30	9.00e-85	304.00
IUUC-Tae-122955	Triticum aestivum	93.96	5.00e-82	295.00
IUUC-Tur-126671	Triticum urartu	93.96	5.00e-82	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence