iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110911

Ensembl Protein ID

Solyc09g056450.2.1

UniProt Accession

K4CTD8; K4CTD8_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc09g056450.2	Solyc09g056450.2.1	Solyc09g056450.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.70e-32	109.6	67	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
            p+ef+Cp+s++lM+dPv+l+sG+tydr  I+kwl+ g++tcP t+q l+++ l+Pn+ +r++i++wc+ n++
   Q: 67   FPDEFRCPLSKQLMTDPVMLASGQTYDRPFIQKWLKAGNRTCPQTQQVLSHTILTPNHLIRNMISQWCKNNGI 139
           69*******************************************************************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAKTDVVEGD PLTVKEIELK RELQRLVKAI LSQEEINVDA IDKTQQILLD LKELKIKRSP 60
SSLDLPFPDE FRCPLSKQLM TDPVMLASGQ TYDRPFIQKW LKAGNRTCPQ TQQVLSHTIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACACTTAGT AGATGACATA ACCCCCCAAA ATCCCCAAAT ATCTATTCTT ACGATATACT 60
CCTCCCTCTC CCTCTCCCTC TCCCTCTCTT CTGTATGTAT GTATATGTAG AGAAAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101262653

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000164	Aegilops tauschii	41.52	5.00e-82	297.00
IUUC-Aly-006420	Arabidopsis lyrata	59.40	2.00e-154	537.00
IUUC-Ath-007457	Arabidopsis thaliana	59.83	2.00e-153	534.00
IUUC-Bdi-014069	Brachypodium distachyon	51.44	2.00e-111	395.00
IUUC-Bol-015599	Brassica oleracea	57.86	8.00e-150	522.00
IUUC-Bra-017223	Brassica rapa	59.61	4.00e-149	520.00
IUUC-Gma-043611	Glycine max	66.59	3.00e-174	603.00
IUUC-Hvu-047411	Hordeum vulgare	44.23	3.00e-79	288.00
IUUC-Lpe-050825	Leersia perrieri	51.83	3.00e-112	397.00
IUUC-Mtr-057877	Medicago truncatula	63.04	1.00e-165	575.00
IUUC-Mac-065616	Musa acuminata	50.97	1.00e-115	409.00
IUUC-Oba-075311	Oryza barthii	52.16	3.00e-108	384.00
IUUC-Obr-076232	Oryza brachyantha	51.89	1.00e-108	385.00
IUUC-Ogl-077647	Oryza glaberrima	50.89	2.00e-112	398.00
IUUC-Ogu-078448	Oryza glumaepatula	50.89	8.00e-113	399.00
IUUC-Oin-079693	Oryza indica	52.16	6.00e-108	383.00
IUUC-Olo-080462	Oryza longistaminata	51.70	7.00e-113	399.00
IUUC-Ome-081796	Oryza meridionalis	51.57	9.00e-112	396.00
IUUC-Oni-082158	Oryza nivara	50.89	9.00e-113	399.00
IUUC-Opu-084131	Oryza punctata	52.09	1.00e-113	402.00
IUUC-Oru-084335	Oryza rufipogon	50.89	9.00e-113	399.00
IUUC-Osa-085556	Oryza sativa	50.89	7.00e-113	399.00
IUUC-Pop-099806	Populus trichocarpa	71.93	0.00e+00	672.00
IUUC-Ppe-101662	Prunus persica	70.61	0.00e+00	642.00
IUUC-Sit-110812	Setaria italica	51.31	3.00e-109	387.00
IUUC-Stu-112732	Solanum tuberosum	97.10	0.00e+00	873.00
IUUC-Sbi-114814	Sorghum bicolor	51.05	3.00e-110	391.00
IUUC-Tca-121080	Theobroma cacao	69.70	0.00e+00	659.00
IUUC-Tae-123657	Triticum aestivum	45.31	2.00e-87	315.00
IUUC-Tur-126060	Triticum urartu	41.12	2.00e-82	298.00
IUUC-Vvi-131168	Vitis vinifera	68.58	0.00e+00	650.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence