iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114335

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G288000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g032360	Sb04g032360.1	Sb04g032360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.50e-10	40.7	91	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++   + ++vlp C+++fh+dC+ +w         + rCP+C+
   Q: 91   CPICLDPMepGRAVRVLPgCNRAFHKDCVDQW------LAISPRCPVCN 133
           ********66555*******************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAQVWAVSLA VASLAIGMLG VLGVWLCYLF DAVARGRAPR TPPPTPQTEE EEEKGGKNGL 60
SEAELMRLGG VVAVLESTDR EEEEEEEEAL CPICLDPMEP GRAVRVLPGC NRAFHKDCVD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGG TGTGGGCGGT GTCCCTGGCG GTGGCGTCGC TCGCCATCGG CATGCTCGGG 60
GTGCTCGGCG TCTGGCTCTG CTACCTCTTC GACGCCGTGG CTCGGGGCCG CGCTCCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_04g032360

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000594	Aegilops tauschii	72.59	3.00e-41	159.00
IUUC-Bdi-014807	Brachypodium distachyon	68.89	9.00e-37	144.00
IUUC-Hvu-047412	Hordeum vulgare	92.11	2.00e-18	82.40
IUUC-Lpe-051097	Leersia perrieri	67.91	1.00e-31	127.00
IUUC-Oba-075278	Oryza barthii	67.39	3.00e-14	69.70
IUUC-Obr-076543	Oryza brachyantha	63.97	6.00e-35	139.00
IUUC-Ogl-077656	Oryza glaberrima	64.93	6.00e-35	138.00
IUUC-Ogu-078471	Oryza glumaepatula	65.67	6.00e-35	138.00
IUUC-Oin-079493	Oryza indica	64.93	4.00e-34	135.00
IUUC-Olo-080661	Oryza longistaminata	67.80	1.00e-30	124.00
IUUC-Ome-081899	Oryza meridionalis	66.92	1.00e-35	141.00
IUUC-Oni-082549	Oryza nivara	65.67	6.00e-35	138.00
IUUC-Opu-083427	Oryza punctata	67.67	2.00e-36	144.00
IUUC-Oru-084437	Oryza rufipogon	65.67	6.00e-35	138.00
IUUC-Osa-085580	Oryza sativa	65.67	5.00e-35	139.00
IUUC-Sit-109718	Setaria italica	80.75	4.00e-40	156.00
IUUC-Tae-124565	Triticum aestivum	72.59	5.00e-42	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence