iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014593

UUCD1 version

UUC-BrD-01168

Ensembl Protein ID

BRADI3G52800.1

UniProt Accession

I1ID13; I1ID13_BRADI

Genbank Protein ID

KQK00944.1; KQK00945.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882; CM000882

Gene Name

LOC100822859; BRADI_3g52800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G52800	BRADI3G52800.1	BRADI3G52800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-29	102.8	272	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p e++CpIs +lM+dPv++ sG+ty+r++Iekw+++g+ tcP tr +l++  ++Pn+ +r+li +wc+e++
   Q: 272  PPTELCCPISTKLMHDPVIITSGQTYEREYIEKWFSQGHDTCPRTRIKLENFAMIPNTCMRDLICNWCQEHG 343
           699*******************************************************************97 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDSYSSWMEN TASSQRNSCP KVHSSLCSEL TIMLDKVSSI LPSIEAARPG CKAGIQELCN 60
LYNIVGKGKL ITQHCVECSK LYLAITGEAI LVRCERVRDS LKRSLFLIQN MVPTVLANQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCCCCCAC CCAGCCACCC TTCCCTTCCC TCCCTGCCGC CGTCTTTATC CGCCCCCGTT 60
TTCTAGAGTG GTCAGACTGG TCCGAGAGAA CCCTCCGTTC ATCCATAGCG CCCGACTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100822859

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	80.00	0.00e+00	1216.00
IUUC-Gma-044030	Glycine max	35.12	2.00e-116	412.00
IUUC-Hvu-047756	Hordeum vulgare	79.74	0.00e+00	1211.00
IUUC-Lpe-050784	Leersia perrieri	75.35	0.00e+00	1100.00
IUUC-Mtr-058085	Medicago truncatula	33.47	1.00e-115	410.00
IUUC-Mac-064841	Musa acuminata	45.38	3.00e-176	611.00
IUUC-Oba-075842	Oryza barthii	76.57	0.00e+00	1112.00
IUUC-Obr-076217	Oryza brachyantha	75.80	0.00e+00	1114.00
IUUC-Ogl-077921	Oryza glaberrima	76.82	0.00e+00	1122.00
IUUC-Ogu-078199	Oryza glumaepatula	75.38	0.00e+00	1114.00
IUUC-Oin-079116	Oryza indica	76.31	0.00e+00	1130.00
IUUC-Olo-080352	Oryza longistaminata	73.67	0.00e+00	1018.00
IUUC-Ome-081110	Oryza meridionalis	76.18	0.00e+00	1122.00
IUUC-Oni-082415	Oryza nivara	75.90	0.00e+00	1117.00
IUUC-Opu-083658	Oryza punctata	75.80	0.00e+00	1086.00
IUUC-Oru-084974	Oryza rufipogon	76.06	0.00e+00	1121.00
IUUC-Osa-086052	Oryza sativa	76.82	0.00e+00	1122.00
IUUC-Pop-099657	Populus trichocarpa	37.50	2.00e-131	462.00
IUUC-Sit-110432	Setaria italica	74.03	0.00e+00	1051.00
IUUC-Sly-111406	Solanum lycopersicum	37.06	4.00e-108	384.00
IUUC-Stu-112174	Solanum tuberosum	36.78	6.00e-112	397.00
IUUC-Sbi-113885	Sorghum bicolor	73.57	0.00e+00	998.00
IUUC-Tca-121394	Theobroma cacao	35.38	3.00e-115	408.00
IUUC-Tae-125779	Triticum aestivum	79.15	0.00e+00	1217.00
IUUC-Tur-126678	Triticum urartu	80.09	0.00e+00	1085.00
IUUC-Vvi-130887	Vitis vinifera	35.00	2.00e-108	386.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence