iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017718

Ensembl Protein ID

Bra039752.1-P

UniProt Accession

M4FF80; M4FF80_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039752	Bra039752.1	Bra039752.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-32	111.1	28	100

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f CpIs++lM+dPv+++sGitydr++Iekw++sg++tcPvt++ l+  +++Pn+++rr+iq+wc +++s
   Q: 28   IPSQFQCPISYDLMKDPVIIASGITYDRENIEKWFESGNQTCPVTNTVLATLEQTPNHAIRRMIQEWCVAKGS 100
           89******************************************************************99876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRRRGGAKKD ILTPAMSSSE EEEEEIVIPS QFQCPISYDL MKDPVIIASG ITYDRENIEK 60
WFESGNQTCP VTNTVLATLE QTPNHAIRRM IQEWCVAKGS SLDRVPTPRV PISSHQAIEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACGGC GAGGAGGAGC CAAGAAGGAC ATACTAACTC CGGCGATGAG TTCCTCGGAG 60
GAAGAGGAGG AAGAAATCGT TATTCCGTCG CAGTTTCAGT GTCCGATATC GTACGATTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006049	Arabidopsis lyrata	74.38	1.00e-155	541.00
IUUC-Ath-007695	Arabidopsis thaliana	74.38	1.00e-154	538.00
IUUC-Bol-015846	Brassica oleracea	97.12	0.00e+00	778.00
IUUC-Lpe-050847	Leersia perrieri	39.38	2.00e-65	243.00
IUUC-Mtr-058526	Medicago truncatula	44.36	8.00e-90	323.00
IUUC-Mac-064571	Musa acuminata	38.82	8.00e-39	154.00
IUUC-Ogl-076969	Oryza glaberrima	39.86	3.00e-71	261.00
IUUC-Ogu-078872	Oryza glumaepatula	39.53	6.00e-74	271.00
IUUC-Oin-079622	Oryza indica	39.86	3.00e-71	261.00
IUUC-Olo-080664	Oryza longistaminata	38.54	7.00e-42	164.00
IUUC-Ome-081665	Oryza meridionalis	35.68	2.00e-59	222.00
IUUC-Oni-082871	Oryza nivara	39.86	3.00e-71	261.00
IUUC-Opu-084061	Oryza punctata	37.61	3.00e-71	261.00
IUUC-Oru-084561	Oryza rufipogon	39.86	3.00e-71	262.00
IUUC-Osa-086045	Oryza sativa	39.86	3.00e-71	261.00
IUUC-Sit-109976	Setaria italica	40.81	3.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence