iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002783

Ensembl Protein ID

ERN13671

UniProt Accession

W1Q005; W1Q005_AMBTC

Genbank Protein ID

ERN13671.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392567

Gene Name

AMTR_s00049p00123610

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00049p00123610	ERN13671	ERN13671

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-23	82.1	208	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           H+d v+++a  + ++l s s+D+t+k+W+l++ ++l
   Q: 208  HADAVSAIAInP-GFLYSVSWDKTLKIWRLSDYKCL 242
           99********55.****************9887776 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAVPSWLTVC STLMARKSSL SPENQDSPAS SSTSGSSSDN PSSTETSLNS ETSLQSIGSL 60
YSLPSVASLQ LHSTPQENLS PINFRLISSV ELNSGAIQAL HLAGKCLYTG TSGNQIQALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGTAC CCTCTTGGTT AACCGTCTGC TCCACTCTCA TGGCCCGAAA ATCGTCGCTA 60
TCGCCCGAAA ATCAAGATTC TCCAGCCTCC TCTTCCACCT CTGGGTCGAG CTCAGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

atr:18441917

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006280	Arabidopsis lyrata	54.41	6.00e-99	353.00
IUUC-Ath-006951	Arabidopsis thaliana	53.82	4.00e-98	350.00
IUUC-Bdi-014607	Brachypodium distachyon	39.29	3.00e-68	251.00
IUUC-Bol-015495	Brassica oleracea	53.87	5.00e-88	317.00
IUUC-Bra-017464	Brassica rapa	52.67	1.00e-99	355.00
IUUC-Gma-043162	Glycine max	52.51	4.00e-93	334.00
IUUC-Hvu-047304	Hordeum vulgare	42.74	1.00e-71	262.00
IUUC-Lpe-050736	Leersia perrieri	39.66	8.00e-65	239.00
IUUC-Mtr-057789	Medicago truncatula	50.39	4.00e-95	340.00
IUUC-Mac-065257	Musa acuminata	47.01	7.00e-79	286.00
IUUC-Oba-075265	Oryza barthii	39.71	2.00e-53	201.00
IUUC-Obr-076628	Oryza brachyantha	37.67	2.00e-60	225.00
IUUC-Ogl-076961	Oryza glaberrima	43.29	2.00e-57	215.00
IUUC-Ogu-078745	Oryza glumaepatula	44.97	3.00e-63	234.00
IUUC-Oin-079355	Oryza indica	43.29	3.00e-57	214.00
IUUC-Olo-080540	Oryza longistaminata	44.49	2.00e-51	194.00
IUUC-Ome-081476	Oryza meridionalis	44.44	7.00e-59	219.00
IUUC-Oni-082952	Oryza nivara	43.29	3.00e-57	214.00
IUUC-Opu-083726	Oryza punctata	41.26	4.00e-64	237.00
IUUC-Oru-084480	Oryza rufipogon	42.95	2.00e-56	211.00
IUUC-Osa-086252	Oryza sativa	42.95	1.00e-56	212.00
IUUC-Pop-100092	Populus trichocarpa	52.84	5.00e-96	343.00
IUUC-Ppe-101598	Prunus persica	53.82	2.00e-91	327.00
IUUC-Smo-108947	Selaginella moellendorffii	40.00	1.00e-48	186.00
IUUC-Sit-109950	Setaria italica	40.48	5.00e-54	203.00
IUUC-Sly-111566	Solanum lycopersicum	50.14	8.00e-94	336.00
IUUC-Stu-112893	Solanum tuberosum	50.14	6.00e-92	329.00
IUUC-Sbi-114568	Sorghum bicolor	41.58	1.00e-60	225.00
IUUC-Tca-121847	Theobroma cacao	55.15	6.00e-93	333.00
IUUC-Tae-123809	Triticum aestivum	48.23	3.00e-56	211.00
IUUC-Tur-126500	Triticum urartu	42.35	3.00e-72	264.00
IUUC-Vvi-130905	Vitis vinifera	53.87	1.00e-96	345.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence