iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018099

Ensembl Protein ID

Bra024637.1-P

UniProt Accession

M4E782; M4E782_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra024637	Bra024637.1	Bra024637.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-29	100.9	180	217
UBD/Beta-Prp	5.60e-45	154.8	67	344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+ +d  ll s+s+D + k+W+ +++++l 
   Q: 180  HVDAVSSLALsQDgSLLYSASWDRSFKIWRASDFKCLE 217
           99*********8889***************99999986 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdls................... 82
           +h+s++++++   +++ l+tgs +g i+vw  +++       +   +++v+++ +  d   l+++++D+ i+vw                      
   Q: 67   DHSSYVSSLAL--SRKSLFTGSSNGDIRVWPREPPFSstGNIVAAGSGGVKSLVILGD--KLISAHQDHKIRVWKTIdetkykcvatlptmndrft 158
           68888998999..8899**************999876534455***************..6*************5545777889999999999999 PP
   S: 83   ...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl. 166
                       +   +t+ +h d v sl++s++g+ l s+s+dr  ++w  +  +cle++++ hd+++n +vv+ dg+ + +Gs D+t+++W+  
   Q: 159  slfsqksyvevRRHKKSTWVNHVDAVSSLALSQDGSLLYSASWDRSFKIWRASDFKCLESIEKAHDDAINAIVVSRDGF-CYTGSGDKTIKVWRKk 253
           9999999999988888999999999999************************************************665.67***********999 PP
   S: 167  .ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq..........tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
            k+ +l+ tl++ h ++v+ l+++++gk l sg++d+++ +w+            + ++v +l+ght+ + ++++   +++++sgs+D+s+r+W
   Q: 254  dKSHSLVATLKK-HLSAVNALAVSEDGKVLYSGACDRSILVWERLsngdgddeelHMTVVGALRGHTKAIMCLAVA--SDLVLSGSADKSLRVW 344
           999********9.*****************************97679999988888888*****************..**************** PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSFFPCSCPL SCNKTRSECQ KKSTHHQSEP STSVSLLSQP SLPLVPSLSS PLQSSTVEHQ 60
CLATLTDHSS YVSSLALSRK SLFTGSSNGD IRVWPREPPF SSTGNIVAAG SGGVKSLVIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTCT TCCCATGTTC TTGTCCTCTG TCTTGCAATA AAACAAGATC AGAATGTCAA 60
AAGAAATCTA CTCATCACCA ATCAGAACCA TCCACGTCGG TATCACTTCT GTCTCAACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006722	Arabidopsis thaliana	83.05	2.00e-163	568.00
IUUC-Bdi-014607	Brachypodium distachyon	45.48	2.00e-84	305.00
IUUC-Bol-016325	Brassica oleracea	96.34	0.00e+00	661.00
IUUC-Gma-043262	Glycine max	56.17	2.00e-113	402.00
IUUC-Hvu-047304	Hordeum vulgare	46.85	9.00e-86	310.00
IUUC-Lpe-050736	Leersia perrieri	45.37	4.00e-83	301.00
IUUC-Mtr-057831	Medicago truncatula	55.64	5.00e-108	384.00
IUUC-Mac-064538	Musa acuminata	51.23	6.00e-96	343.00
IUUC-Oba-075265	Oryza barthii	44.68	5.00e-70	258.00
IUUC-Obr-076628	Oryza brachyantha	44.75	1.00e-76	280.00
IUUC-Ogl-076961	Oryza glaberrima	45.17	4.00e-75	274.00
IUUC-Ogu-078745	Oryza glumaepatula	44.90	1.00e-80	293.00
IUUC-Oin-079355	Oryza indica	45.01	2.00e-73	269.00
IUUC-Olo-080540	Oryza longistaminata	43.28	1.00e-68	253.00
IUUC-Ome-081476	Oryza meridionalis	45.48	1.00e-74	273.00
IUUC-Oni-082952	Oryza nivara	44.90	2.00e-73	269.00
IUUC-Opu-083726	Oryza punctata	47.50	4.00e-81	294.00
IUUC-Oru-084480	Oryza rufipogon	44.77	1.00e-72	266.00
IUUC-Osa-086252	Oryza sativa	44.69	5.00e-73	267.00
IUUC-Ppa-095765	Physcomitrella patens	44.16	2.00e-76	279.00
IUUC-Ppe-101888	Prunus persica	60.11	5.00e-102	364.00
IUUC-Sit-109950	Setaria italica	50.54	3.00e-78	285.00
IUUC-Sly-111917	Solanum lycopersicum	57.73	5.00e-106	377.00
IUUC-Stu-112480	Solanum tuberosum	59.17	5.00e-107	380.00
IUUC-Sbi-114568	Sorghum bicolor	49.22	5.00e-80	291.00
IUUC-Tae-122815	Triticum aestivum	47.25	1.00e-84	306.00
IUUC-Tur-126500	Triticum urartu	47.25	3.00e-85	308.00
IUUC-Vvi-131635	Vitis vinifera	60.57	3.00e-124	437.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence