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Tag Content
iUUCD ID IUUC-Tca-121089
Ensembl Protein ID EOY20601
UniProt Accession A0A061FTT2; A0A061FTT2_THECC
Genbank Protein ID EOY20601.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CM001881
Gene Name TCM_011979
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TCM_011979 EOY20601 EOY20601
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.70e-37 125.6 188 225
UBD/Beta-Prp 5.50e-43 148.2 126 402
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H d v++la+ d tll s s+D t+k+W+++++++l
   Q: 188 HVDTVSALALsRDeTLLYSVSWDRTLKIWRTSDFKCLE 225
    99*********888********************9986 PP
   


   UBD/Beta-Prp

   S: 65   kilvtgseDrtikvwdls..................................tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
    + l ++++D+ i+vw +s + + t+ h d+v +l++s++ l s s+drt+++w ++ +cle+
   Q: 126 DKLFSAHQDHKIRVWKISnedpdnqkytrlatlptlsdratklllpknhvqvRRHKTCTWVHHVDTVSALALSRDETLLYSVSWDRTLKIWRTSDFKCLES 226
    3699***********88888888***************************998888888888*************************************** PP
   S: 132 tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl....ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgecvrtlnghtd 223
    + + hd+++n v++++dg++ +Gs+D+++++W+ kt +l+ tl++ h++ ++sl+++++g l sg+ d+++ +w+ ++v +l+ght+
   Q: 227 VSNAHDDAINAVALSDDGDV-YTGSTDKKIKVWRRssgeKTHSLVATLEK-HNSGINSLAISPDGSTLYSGASDRSIVVWEKDggdgnGMTVVGALRGHTK 325
    ****************8875.59************999999999999999.******************************9988884445699******* PP
   S: 224 nvksvrfspnderlvsgssDgsiriW....dlrsgdllktlqlhnssvisvav....lsfg..dnvlvlgsedskvniwk 293
    +++++++ ++++ sgs+D++iriW d +s ++ l++h+ v + a+ +++ v+++gs d++v++w+
   Q: 326 PILCLAVV--SDLVCSGSADKTIRIWrrgvD-TSYSCWAILEGHQGPVKCLAGavdrCNPSdtSYVIYSGSLDCDVKVWQ 402
    ********..******************988.899**********999999988888666643567777877*******8 PP
   

Organism Theobroma cacao
Protein Sequence
(Fasta)
MSGQQFCYSN YDSQSQSSRF QSDSTSLWSQ PSLPSVPSLT SQFHPQQYHL SNIRHHCLAT 60
LKGHTSYVSS LTFAGKFLYT GSSDKEIRLW KRNTTVDSEP DYDNLTNNNI IAVGKGAVKS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tca-121089|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CACTTCACGT TCTTCCACCG TGTGCTTTCT CTCTCTCTCT CTCTCTCCCT CTTTCTTTTC 60
TATGTTTTAC TGGTATAAGA ATCATGTCAG GCCAGCAATT TTGTTATTCG AATTATGATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tca-121089|E3,WD_repeat;UBD,Beta-Prp|Theobroma cacao
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-005752 Arabidopsis lyrata 58.88 1.00e-122 432.00
IUUC-Ath-006904 Arabidopsis thaliana 59.95 5.00e-119 419.00
IUUC-Bdi-014607 Brachypodium distachyon 46.81 1.00e-95 342.00
IUUC-Bol-016325 Brassica oleracea 58.79 6.00e-104 370.00
IUUC-Bra-017764 Brassica rapa 59.79 7.00e-115 406.00
IUUC-Csv-026163 Ciona savignyi 26.30 6.00e-20 91.70
IUUC-Gma-043423 Glycine max 66.76 1.00e-140 491.00
IUUC-Hvu-047304 Hordeum vulgare 47.79 4.00e-95 340.00
IUUC-Lpe-050736 Leersia perrieri 47.16 6.00e-94 337.00
IUUC-Mtr-058389 Medicago truncatula 59.95 4.00e-121 427.00
IUUC-Mac-065157 Musa acuminata 54.21 2.00e-97 348.00
IUUC-Oba-075265 Oryza barthii 47.11 1.00e-72 266.00
IUUC-Obr-076628 Oryza brachyantha 44.39 3.00e-91 328.00
IUUC-Ogl-076961 Oryza glaberrima 44.44 9.00e-84 303.00
IUUC-Ogu-078745 Oryza glumaepatula 44.10 2.00e-89 321.00
IUUC-Oin-079355 Oryza indica 44.20 3.00e-82 298.00
IUUC-Olo-080540 Oryza longistaminata 43.03 1.00e-76 279.00
IUUC-Ome-081476 Oryza meridionalis 45.15 1.00e-82 299.00
IUUC-Oni-082952 Oryza nivara 44.10 4.00e-82 297.00
IUUC-Opu-083726 Oryza punctata 47.15 1.00e-89 322.00
IUUC-Oru-084480 Oryza rufipogon 43.96 2.00e-81 295.00
IUUC-Osa-086252 Oryza sativa 43.96 1.00e-81 295.00
IUUC-Ppa-095309 Physcomitrella patens 46.67 3.00e-80 291.00
IUUC-Pop-099181 Populus trichocarpa 74.74 1.00e-145 508.00
IUUC-Ppe-101853 Prunus persica 71.23 3.00e-145 507.00
IUUC-Sit-109950 Setaria italica 49.86 8.00e-79 286.00
IUUC-Sly-111471 Solanum lycopersicum 61.54 3.00e-132 464.00
IUUC-Stu-112792 Solanum tuberosum 62.02 3.00e-128 450.00
IUUC-Sbi-114568 Sorghum bicolor 44.53 3.00e-80 291.00
IUUC-Tae-123280 Triticum aestivum 46.83 6.00e-90 323.00
IUUC-Tur-126500 Triticum urartu 48.48 2.00e-94 338.00
IUUC-Vvi-131013 Vitis vinifera 74.86 1.00e-149 521.00
Created Date 25-Jun-2017

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