iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-119844

Ensembl Protein ID

ENSTNIP00000023043.1

UniProt Accession

Q4RBH0; Q4RBH0_TETNG

Genbank Protein ID

CAG14263.1

Protein Name

Chromosome undetermined SCAF21483, whole genome shotgun sequence

Genbank Nucleotide ID

CAAE01021483

Gene Name

arpc1a; GSTENG00038514001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000019780.1	ENSTNIT00000023285.1	ENSTNIP00000023043.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-13	49.6	51	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++ +t++++ +  +++v+++ D + +vW+ ++
   Q: 51   HNGHITGIDWaPKsDRIVTCGADRNAYVWSQKD 83
           9999*******6669**************9665 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MSLHQFLLEP ITCHAWNRDR TQIAISPNNH EVHIYKKSGN QWLKTHELKE HNGHITGIDW 60
APKSDRIVTC GADRNAYVWS QKDGLWKPTL VILRINRAAT FVKWSPLENK FAVGSGARLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTATCTTAG TTCACGTAAG ACTGTATGCC TGGCATTTTG GGACAGGTTG TGCACTAGAT 60
GGTGGTGTTT GTAACCGGTT GGGTCACTTT GGGTGTTTCT ATTTGAACCA CTAGAGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030140--ARC1A
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

tng:GSTEN00038514G001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	44.84	8.00e-63	234.00
IUUC-Aml-002044	Ailuropoda melanoleuca	89.46	0.00e+00	679.00
IUUC-Atr-002844	Amborella trichopoda	47.93	2.00e-53	202.00
IUUC-Apl-003325	Anas platyrhynchos	91.62	0.00e+00	706.00
IUUC-Aca-004736	Anolis carolinensis	91.35	0.00e+00	703.00
IUUC-Aly-005532	Arabidopsis lyrata	41.64	8.00e-80	290.00
IUUC-Ath-006683	Arabidopsis thaliana	41.38	3.00e-79	288.00
IUUC-Ago-007966	Ashbya gossypii	38.83	9.00e-66	243.00
IUUC-Acl-008334	Aspergillus clavatus	48.61	9.00e-97	346.00
IUUC-Afl-008485	Aspergillus flavus	48.61	1.00e-92	333.00
IUUC-Afu-008780	Aspergillus fumigatus	48.61	2.00e-97	348.00
IUUC-Ani-009417	Aspergillus nidulans	48.75	2.00e-96	345.00
IUUC-Ang-009543	Aspergillus niger	50.14	3.00e-98	351.00
IUUC-Aor-010234	Aspergillus oryzae	48.89	8.00e-95	340.00
IUUC-Ate-010386	Aspergillus terreus	49.72	5.00e-99	353.00
IUUC-Ame-011852	Astyanax mexicanus	91.62	0.00e+00	707.00
IUUC-Bgr-012192	Blumeria graminis	44.32	2.00e-87	315.00
IUUC-Bta-012530	Bos taurus	89.46	0.00e+00	679.00
IUUC-Bci-013616	Botrytis cinerea	46.54	1.00e-91	329.00
IUUC-Bdi-014632	Brachypodium distachyon	41.85	2.00e-78	285.00
IUUC-Bol-016274	Brassica oleracea	42.33	3.00e-81	295.00
IUUC-Bra-016790	Brassica rapa	41.27	2.00e-80	292.00
IUUC-Cel-018122	Caenorhabditis elegans	55.46	5.00e-109	387.00
IUUC-Cja-019362	Callithrix jacchus	89.46	0.00e+00	679.00
IUUC-Cfa-020167	Canis familiaris	89.46	0.00e+00	681.00
IUUC-Cpo-021933	Cavia porcellus	89.46	0.00e+00	681.00
IUUC-Cho-024449	Choloepus hoffmanni	67.92	2.00e-87	315.00
IUUC-Cin-025186	Ciona intestinalis	56.49	7.00e-119	419.00
IUUC-Csv-026275	Ciona savignyi	56.32	3.00e-115	407.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	46.24	8.00e-92	330.00
IUUC-Cne-026926	Cryptococcus neoformans	46.40	2.00e-99	355.00
IUUC-Dre-028057	Danio rerio	91.35	0.00e+00	705.00
IUUC-Dno-029092	Dasypus novemcinctus	89.94	0.00e+00	656.00
IUUC-Dor-030391	Dipodomys ordii	89.11	0.00e+00	654.00
IUUC-Dse-031574	Dothistroma septosporum	46.03	7.00e-87	313.00
IUUC-Dme-031907	Drosophila melanogaster	55.04	2.00e-122	431.00
IUUC-Eca-034074	Equus caballus	89.46	0.00e+00	679.00
IUUC-Eeu-035041	Erinaceus europaeus	72.80	9.00e-84	303.00
IUUC-Fca-036154	Felis catus	89.46	0.00e+00	679.00
IUUC-Fal-037279	Ficedula albicollis	91.62	0.00e+00	704.00
IUUC-Fox-037842	Fusarium oxysporum	47.08	3.00e-91	328.00
IUUC-Fso-038276	Fusarium solani	46.52	1.00e-90	325.00
IUUC-Gmo-039673	Gadus morhua	95.14	0.00e+00	688.00
IUUC-Ggr-039762	Gaeumannomyces graminis	45.56	1.00e-89	322.00
IUUC-Gga-040189	Gallus gallus	91.35	0.00e+00	702.00
IUUC-Gac-042531	Gasterosteus aculeatus	97.30	0.00e+00	696.00
IUUC-Gma-042803	Glycine max	42.36	1.00e-78	286.00
IUUC-Hsa-046309	Homo sapiens	89.46	0.00e+00	679.00
IUUC-Hvu-047456	Hordeum vulgare	29.05	2.00e-17	81.60
IUUC-Itr-047864	Ictidomys tridecemlineatus	89.46	0.00e+00	679.00
IUUC-Kpa-049288	Komagataella pastoris	41.19	2.00e-75	275.00
IUUC-Lch-050427	Latimeria chalumnae	88.68	0.00e+00	684.00
IUUC-Lpe-050869	Leersia perrieri	41.21	3.00e-78	285.00
IUUC-Loc-052532	Lepisosteus oculatus	91.40	0.00e+00	694.00
IUUC-Lma-053109	Leptosphaeria maculans	45.58	8.00e-90	323.00
IUUC-Laf-054271	Loxodonta africana	89.19	0.00e+00	678.00
IUUC-Mcc-054857	Macaca mulatta	88.56	0.00e+00	657.00
IUUC-Meu-056540	Macropus eugenii	86.49	6.00e-171	592.00
IUUC-Mor-057167	Magnaporthe oryzae	44.60	4.00e-88	318.00
IUUC-Mtr-057659	Medicago truncatula	43.55	4.00e-80	291.00
IUUC-Mla-058886	Melampsora laricipopulina	44.47	8.00e-92	330.00
IUUC-Mga-059327	Meleagris gallopavo	91.35	0.00e+00	702.00
IUUC-Mvi-060302	Microbotryum violaceum	46.25	6.00e-94	337.00
IUUC-Mmr-060765	Microcebus murinus	88.32	0.00e+00	660.00
IUUC-Mdo-062326	Monodelphis domestica	90.54	0.00e+00	687.00
IUUC-Mmu-063819	Mus musculus	89.46	0.00e+00	679.00
IUUC-Mac-064632	Musa acuminata	41.58	1.00e-79	289.00
IUUC-Mlu-067184	Myotis lucifugus	89.46	0.00e+00	681.00
IUUC-Nfi-068383	Neosartorya fischeri	48.89	2.00e-97	348.00
IUUC-Ncr-068777	Neurospora crassa	45.18	5.00e-90	324.00
IUUC-Nle-069900	Nomascus leucogenys	89.46	0.00e+00	679.00
IUUC-Opr-070386	Ochotona princeps	81.08	5.00e-172	596.00
IUUC-Ont-071283	Oreochromis niloticus	97.03	0.00e+00	697.00
IUUC-Oan-073139	Ornithorhynchus anatinus	90.00	0.00e+00	686.00
IUUC-Ocu-074340	Oryctolagus cuniculus	89.46	0.00e+00	679.00
IUUC-Oba-075379	Oryza barthii	41.76	3.00e-78	285.00
IUUC-Obr-076404	Oryza brachyantha	41.37	1.00e-79	290.00
IUUC-Ogl-077409	Oryza glaberrima	38.90	2.00e-71	262.00
IUUC-Ogu-078759	Oryza glumaepatula	41.76	3.00e-78	285.00
IUUC-Oin-079118	Oryza indica	41.64	1.00e-78	286.00
IUUC-Olo-081055	Oryza longistaminata	45.49	6.00e-67	247.00
IUUC-Ome-081281	Oryza meridionalis	41.76	3.00e-78	285.00
IUUC-Oni-083043	Oryza nivara	41.76	3.00e-78	285.00
IUUC-Opu-083392	Oryza punctata	33.52	1.00e-55	210.00
IUUC-Oru-084839	Oryza rufipogon	41.76	3.00e-78	285.00
IUUC-Osa-085377	Oryza sativa	41.64	1.00e-78	286.00
IUUC-Ola-087274	Oryzias latipes	94.34	0.00e+00	666.00
IUUC-Oga-088016	Otolemur garnettii	89.19	0.00e+00	677.00
IUUC-Oar-089613	Ovis aries	89.19	0.00e+00	677.00
IUUC-Ptr-091548	Pan troglodytes	89.46	0.00e+00	679.00
IUUC-Psi-093767	Pelodiscus sinensis	91.35	0.00e+00	705.00
IUUC-Pma-094124	Petromyzon marinus	78.05	3.00e-179	620.00
IUUC-Pno-095031	Phaeosphaeria nodorum	45.33	2.00e-88	319.00
IUUC-Ppa-095858	Physcomitrella patens	47.30	2.00e-86	312.00
IUUC-Pfo-097107	Poecilia formosa	97.30	0.00e+00	694.00
IUUC-Pop-098954	Populus trichocarpa	36.70	1.00e-42	166.00
IUUC-Pva-102908	Pteropus vampyrus	86.78	3.00e-171	593.00
IUUC-Pgr-103309	Puccinia graminis	44.58	5.00e-93	334.00
IUUC-Ptt-103959	Puccinia triticina	44.67	2.00e-94	338.00
IUUC-Pte-104384	Pyrenophora teres	47.08	4.00e-89	321.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	47.35	6.00e-89	320.00
IUUC-Rno-105008	Rattus norvegicus	88.99	2.00e-171	594.00
IUUC-Sce-106411	Saccharomyces cerevisiae	36.65	1.00e-62	233.00
IUUC-Sha-106691	Sarcophilus harrisii	90.19	0.00e+00	681.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	47.58	3.00e-91	328.00
IUUC-Spo-108053	Schizosaccharomyces pombe	44.53	1.00e-89	323.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	46.81	5.00e-92	330.00
IUUC-Smo-108836	Selaginella moellendorffii	44.68	1.00e-81	296.00
IUUC-Sit-110150	Setaria italica	42.01	3.00e-80	291.00
IUUC-Sly-111048	Solanum lycopersicum	41.58	5.00e-78	284.00
IUUC-Sar-113599	Sorex araneus	78.21	2.00e-161	561.00
IUUC-Sbi-114685	Sorghum bicolor	42.66	3.00e-77	281.00
IUUC-Sre-115090	Sporisorium reilianum	45.83	3.00e-95	342.00
IUUC-Ssc-115851	Sus scrofa	89.73	0.00e+00	680.00
IUUC-Tgu-116701	Taeniopygia guttata	91.62	0.00e+00	704.00
IUUC-Tru-117603	Takifugu rubripes	96.28	0.00e+00	708.00
IUUC-Tsy-119515	Tarsius syrichta	85.42	2.00e-72	265.00
IUUC-Tca-121645	Theobroma cacao	42.47	1.00e-80	293.00
IUUC-Tre-122045	Trichoderma reesei	46.52	2.00e-90	325.00
IUUC-Tvi-122523	Trichoderma virens	46.39	5.00e-90	324.00
IUUC-Tae-123562	Triticum aestivum	41.09	3.00e-70	258.00
IUUC-Tur-126640	Triticum urartu	39.50	4.00e-68	251.00
IUUC-Tme-127018	Tuber melanosporum	45.75	3.00e-86	311.00
IUUC-Tbe-127321	Tupaia belangeri	89.30	4.00e-172	596.00
IUUC-Ttr-128178	Tursiops truncatus	89.08	0.00e+00	634.00
IUUC-Uma-129423	Ustilago maydis	45.57	2.00e-96	346.00
IUUC-Vda-129706	Verticillium dahliae	46.96	2.00e-92	332.00
IUUC-Xtr-132735	Xenopus tropicalis	81.94	1.00e-177	615.00
IUUC-Xma-133435	Xiphophorus maculatus	97.30	0.00e+00	694.00
IUUC-Yli-134471	Yarrowia lipolytica	45.23	9.00e-83	300.00
IUUC-Zma-135615	Zea mays	41.15	1.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence