iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114865

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G276000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g030990	Sb10g030990.1	Sb10g030990.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.3	120	162

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f +g  ++vlp C H+fh  C+ +w       +++++CP Cr
   Q: 120  CAICLAEFAEGdaLRVLPrCDHAFHVACVDAW------LRTRATCPSCR 162
           ********55544999999*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPRAPASLRL QAAASTATAT PSQQQASSSS PPQQQQQQAA VSVDSDMVVI LASFLCALVC 60
VLGLALVSRC ACRLCGRGPA AASSSAQQEQ APPPKGLKKK AIDALPTVPF TAAASSSSDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGCGTG CCCCGGCGAG CCTCCGCCTC CAGGCAGCAG CCTCCACCGC CACCGCGACA 60
CCGAGCCAGC AGCAGGCGTC GTCGTCGTCT CCTCCCCAGC AGCAGCAGCA GCAGGCGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g030990

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000927	Aegilops tauschii	67.23	1.00e-29	120.00
IUUC-Bdi-014309	Brachypodium distachyon	55.97	1.00e-22	98.60
IUUC-Cpo-022394	Cavia porcellus	37.97	7.00e-14	71.20
IUUC-Ete-033099	Echinops telfairi	36.05	1.00e-14	73.90
IUUC-Hvu-047525	Hordeum vulgare	63.93	9.00e-27	112.00
IUUC-Lch-050178	Latimeria chalumnae	31.71	2.00e-15	76.60
IUUC-Laf-054328	Loxodonta africana	37.21	4.00e-15	75.50
IUUC-Mlu-068129	Myotis lucifugus	43.59	3.00e-15	76.30
IUUC-Oba-075502	Oryza barthii	57.89	2.00e-31	127.00
IUUC-Ogl-077507	Oryza glaberrima	57.89	2.00e-31	127.00
IUUC-Ogu-078762	Oryza glumaepatula	57.89	2.00e-31	127.00
IUUC-Oin-079945	Oryza indica	56.16	6.00e-35	138.00
IUUC-Ome-081340	Oryza meridionalis	58.82	5.00e-26	109.00
IUUC-Oni-082529	Oryza nivara	56.58	7.00e-39	154.00
IUUC-Opu-083589	Oryza punctata	55.86	1.00e-26	112.00
IUUC-Oru-084673	Oryza rufipogon	57.89	3.00e-31	127.00
IUUC-Osa-085373	Oryza sativa	57.52	6.00e-30	122.00
IUUC-Pva-102709	Pteropus vampyrus	36.05	2.00e-14	73.60
IUUC-Sit-110724	Setaria italica	73.15	1.00e-34	138.00
IUUC-Tae-124344	Triticum aestivum	60.00	3.00e-23	100.00
IUUC-Tur-126019	Triticum urartu	68.49	1.00e-23	101.00
IUUC-Xtr-132663	Xenopus tropicalis	42.67	4.00e-15	75.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence