iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016731

Ensembl Protein ID

Bra018101.1-P

UniProt Accession

M4DNL4; M4DNL4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018101	Bra018101.1	Bra018101.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-24	88.4	1246	1577

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkkeaee...fs 85
           tGl+N      C++N ++Q+L+n+  +r  +l+  +++l++      + ++++sl +++++l     + +k+ v+p++l  al+++ +    f+
   Q: 1246 TGLQNEvgEYNCFLNVIIQSLWNLGVFRAEFLR--SSTLDHH--HVGDPCVVCSLYEVLTALSaasrEIRKEPVTPSTLRIALSNLYPDssfFQ 1335
           57888733347**********************..4444444..3345566666666666665555599999*******999999988755688 PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           + + +Da+E+la+++d l++++   ++ +++++ +++    s+   + +    +++ + lF++ + +q+ c +c+ +s r+ + +++  +++ +
   Q: 1336 EAQMNDASEVLAVIFDCLHRSF--AQSASVSDTDSSE----SNYTGSWDCANRTCIAHSLFGMNIFEQLNCYSCGLES-RHMKYTSFFHNINAS 1422
           9*********************..4445555444444....3444555788889*********************998.778889999999977 PP
   S: 180  eetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
             ++++       ++++L+    +++l ++   ++  c k      ++ l++ P+v++  L + +    ++++    +   ++ e+d+s +   
   Q: 1423 ALRNMKvtcpetAFDELLNLVEMNHQLACD--PETGGCGKPN--HIRHFLNTPPHVFTAVLGWQNTC--ESVEDIAATLAALNTEIDISIMYRG 1510
           777666777777999999999999999985..5777776544..567899*************9544..4677788888888888***954444 PP
   S: 268  peekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg...staYvlfYkr 337
                + k +Y+L +vv+++G     HY++++++++++ W+ +dD++V+++ +++++l++++    ++ +l+Y++
   Q: 1511 ----LDPKSIYSLASVVCYYG----QHYHCFAYSHEHDrWIMYDDKTVKVIgSWSDILSMCKkghLQPQLLLYEK 1577
           ....33489************....9*******976666************779****99887777888888887 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGQKKKPPAP RSKQSLSSSA AEAEPSSEVS ACTSSEEPSN LAEIKAECEK ALTSFRRGSY 60
NKAIRLMKES CSRHQHSALI HRVQGTVCVK VSSVYEDAVT KQKYIRSAIE SARKAVELSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCAGA AGAAGAAACC CCCCGCGCCT CGCTCCAAGC AATCGCTATC TTCTTCAGCG 60
GCGGAGGCTG AGCCGTCCTC TGAGGTTTCC GCTTGTACCT CCTCTGAGGA GCCGTCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	47.50	4.00e-57	214.00
IUUC-Aml-001414	Ailuropoda melanoleuca	32.65	3.00e-42	167.00
IUUC-Atr-002451	Amborella trichopoda	43.66	0.00e+00	770.00
IUUC-Apl-003843	Anas platyrhynchos	31.49	7.00e-38	152.00
IUUC-Aca-004351	Anolis carolinensis	32.47	2.00e-41	165.00
IUUC-Aly-005859	Arabidopsis lyrata	75.83	0.00e+00	2282.00
IUUC-Ath-007147	Arabidopsis thaliana	74.84	0.00e+00	2244.00
IUUC-Ame-011525	Astyanax mexicanus	33.80	3.00e-43	171.00
IUUC-Bta-013344	Bos taurus	32.36	1.00e-41	166.00
IUUC-Bdi-015058	Brachypodium distachyon	37.03	8.00e-151	528.00
IUUC-Cja-018724	Callithrix jacchus	32.65	2.00e-42	168.00
IUUC-Cfa-021222	Canis familiaris	32.65	3.00e-42	167.00
IUUC-Cpo-021795	Cavia porcellus	32.65	1.00e-42	168.00
IUUC-Cre-022697	Chlamydomonas reinhardtii	32.23	4.00e-42	167.00
IUUC-Csa-023262	Chlorocebus sabaeus	32.65	3.00e-42	167.00
IUUC-Cho-024422	Choloepus hoffmanni	30.79	8.00e-37	149.00
IUUC-Cin-025752	Ciona intestinalis	28.78	5.00e-11	59.30
IUUC-Csv-026063	Ciona savignyi	27.25	9.00e-33	134.00
IUUC-Dre-028046	Danio rerio	34.01	2.00e-42	168.00
IUUC-Dno-029317	Dasypus novemcinctus	31.20	2.00e-38	154.00
IUUC-Dor-030249	Dipodomys ordii	31.59	7.00e-38	152.00
IUUC-Dme-032071	Drosophila melanogaster	31.09	2.00e-34	141.00
IUUC-Ete-032403	Echinops telfairi	31.59	1.00e-38	154.00
IUUC-Eca-033235	Equus caballus	32.36	7.00e-42	166.00
IUUC-Eeu-035319	Erinaceus europaeus	30.34	1.00e-17	85.10
IUUC-Fca-036070	Felis catus	32.65	3.00e-42	167.00
IUUC-Fal-037089	Ficedula albicollis	31.48	3.00e-42	167.00
IUUC-Gmo-039688	Gadus morhua	29.41	7.00e-38	150.00
IUUC-Gga-041241	Gallus gallus	32.03	6.00e-43	170.00
IUUC-Gac-042157	Gasterosteus aculeatus	33.82	1.00e-43	171.00
IUUC-Gma-043691	Glycine max	53.43	0.00e+00	1581.00
IUUC-Ggo-045626	Gorilla gorilla	32.65	2.00e-42	168.00
IUUC-Hsa-045767	Homo sapiens	32.65	2.00e-42	168.00
IUUC-Hvu-047657	Hordeum vulgare	57.65	1.00e-136	481.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	32.65	3.00e-42	167.00
IUUC-Lch-049712	Latimeria chalumnae	33.72	3.00e-41	162.00
IUUC-Lpe-051572	Leersia perrieri	35.74	7.00e-132	465.00
IUUC-Loc-052615	Lepisosteus oculatus	33.72	1.00e-41	165.00
IUUC-Laf-054578	Loxodonta africana	32.65	9.00e-42	166.00
IUUC-Mcc-054696	Macaca mulatta	32.65	2.00e-42	168.00
IUUC-Meu-056802	Macropus eugenii	26.82	1.00e-26	115.00
IUUC-Mtr-058682	Medicago truncatula	51.76	0.00e+00	1424.00
IUUC-Mga-059684	Meleagris gallopavo	28.86	1.00e-31	132.00
IUUC-Mmr-060701	Microcebus murinus	32.65	4.00e-42	167.00
IUUC-Mdo-062433	Monodelphis domestica	32.20	3.00e-41	164.00
IUUC-Mmu-063480	Mus musculus	32.94	2.00e-42	168.00
IUUC-Mac-064469	Musa acuminata	54.86	2.00e-125	443.00
IUUC-Mpu-066404	Mustela putorius furo	32.65	3.00e-42	167.00
IUUC-Mlu-067841	Myotis lucifugus	32.65	3.00e-42	167.00
IUUC-Nle-070110	Nomascus leucogenys	32.65	1.00e-42	169.00
IUUC-Opr-070676	Ochotona princeps	30.00	6.00e-20	93.60
IUUC-Ont-072449	Oreochromis niloticus	29.97	3.00e-41	163.00
IUUC-Oan-073551	Ornithorhynchus anatinus	32.47	4.00e-42	167.00
IUUC-Ocu-074729	Oryctolagus cuniculus	32.36	8.00e-42	166.00
IUUC-Oba-075174	Oryza barthii	35.51	1.00e-137	484.00
IUUC-Obr-076268	Oryza brachyantha	64.12	3.00e-137	483.00
IUUC-Ogl-077138	Oryza glaberrima	58.72	7.00e-139	488.00
IUUC-Ogu-078705	Oryza glumaepatula	35.47	6.00e-138	485.00
IUUC-Oin-079125	Oryza indica	58.97	5.00e-139	489.00
IUUC-Olo-080872	Oryza longistaminata	54.62	9.00e-122	431.00
IUUC-Ome-081864	Oryza meridionalis	35.84	1.00e-138	488.00
IUUC-Oni-082109	Oryza nivara	35.35	7.00e-138	485.00
IUUC-Opu-083823	Oryza punctata	36.46	4.00e-140	493.00
IUUC-Oru-084310	Oryza rufipogon	35.64	4.00e-141	496.00
IUUC-Osa-085583	Oryza sativa	58.52	6.00e-138	483.00
IUUC-Ola-086742	Oryzias latipes	32.18	6.00e-41	162.00
IUUC-Oga-088920	Otolemur garnettii	32.65	4.00e-42	167.00
IUUC-Oar-089644	Ovis aries	32.65	3.00e-42	167.00
IUUC-Ptr-091530	Pan troglodytes	32.65	1.00e-42	169.00
IUUC-Pan-092190	Papio anubis	32.65	2.00e-42	167.00
IUUC-Psi-094022	Pelodiscus sinensis	32.56	7.00e-42	166.00
IUUC-Pma-094745	Petromyzon marinus	30.29	5.00e-34	137.00
IUUC-Ppa-095930	Physcomitrella patens	36.23	4.00e-150	526.00
IUUC-Pfo-096072	Poecilia formosa	33.62	5.00e-39	156.00
IUUC-Pab-097979	Pongo abelii	32.65	2.00e-42	168.00
IUUC-Pop-099539	Populus trichocarpa	54.58	0.00e+00	1597.00
IUUC-Pca-101005	Procavia capensis	30.38	1.00e-23	105.00
IUUC-Ppe-101918	Prunus persica	56.56	0.00e+00	1639.00
IUUC-Pva-103125	Pteropus vampyrus	31.83	8.00e-42	166.00
IUUC-Rno-105463	Rattus norvegicus	32.36	4.00e-41	164.00
IUUC-Sha-107164	Sarcophilus harrisii	32.37	5.00e-42	167.00
IUUC-Sit-110021	Setaria italica	37.37	2.00e-140	494.00
IUUC-Sly-111258	Solanum lycopersicum	52.82	0.00e+00	1580.00
IUUC-Stu-112904	Solanum tuberosum	54.12	0.00e+00	1525.00
IUUC-Sar-113376	Sorex araneus	32.02	9.00e-21	95.90
IUUC-Sbi-114345	Sorghum bicolor	40.06	2.00e-169	590.00
IUUC-Ssc-115969	Sus scrofa	31.30	1.00e-37	152.00
IUUC-Tgu-116521	Taeniopygia guttata	31.48	8.00e-43	168.00
IUUC-Tru-118155	Takifugu rubripes	30.36	5.00e-36	144.00
IUUC-Tsy-119297	Tarsius syrichta	28.32	5.00e-27	116.00
IUUC-Tni-120582	Tetraodon nigroviridis	32.57	2.00e-39	155.00
IUUC-Tca-121692	Theobroma cacao	58.97	0.00e+00	1744.00
IUUC-Tae-125674	Triticum aestivum	57.04	4.00e-138	486.00
IUUC-Tur-126027	Triticum urartu	58.42	4.00e-138	486.00
IUUC-Tbe-127607	Tupaia belangeri	31.10	2.00e-38	154.00
IUUC-Ttr-128647	Tursiops truncatus	29.91	3.00e-34	140.00
IUUC-Vpa-130213	Vicugna pacos	32.65	3.00e-42	167.00
IUUC-Vvi-131652	Vitis vinifera	57.42	0.00e+00	1654.00
IUUC-Xtr-131831	Xenopus tropicalis	33.53	2.00e-44	174.00
IUUC-Xma-133409	Xiphophorus maculatus	33.05	2.00e-41	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence